RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MDS2Q8NDY4 140 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 OR14A16Q8NHC5 309 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 TCP10LQ8TDR4 215 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 GRHL3Q8TE85 626 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 CHTF18Q8WVB6 975 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 GATA5Q9BWX5 397 aaPredicted RBP14.33□□□□□ -0.12
VAPA-201ENST00000340541 VPS29Q9UBQ0 182 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 CLCA3PQ9Y6N3 262 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 CREBBPQ92793 2442 aa14.33□□□□□ -0.12
VAPA-201ENST00000340541 A0A1W2PS29 197 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 SERTM1A2A2V5 107 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 GABRR3A8MPY1 467 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 C17orf105B2RV13 164 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 PGRMC2O15173 223 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 TYROBPO43914 113 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 GPR75O95800 540 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 KRT71Q3SY84 523 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 CCNYL2Q5T2Q4 361 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 ZNF787Q6DD87 383 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 PAGE2Q7Z2X7 111 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 ZNF227Q86WZ6 799 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 TICAM1Q8IUC6 712 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 C1orf52Q8N6N3 182 aaKnown RBP14.32□□□□□ -0.12
VAPA-201ENST00000340541 GBP7Q8N8V2 638 aaPredicted RBP14.32□□□□□ -0.12
VAPA-201ENST00000340541 DAZLQ92904 295 aaKnown RBP14.32□□□□□ -0.12
VAPA-201ENST00000340541 C11orf24Q96F05 449 aaPredicted RBP14.32□□□□□ -0.12
VAPA-201ENST00000340541 SIGLEC12Q96PQ1 595 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 FAM111AQ96PZ2 611 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 TAAR6Q96RI8 345 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 DEFB126Q9BYW3 111 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.32□□□□□ -0.12
VAPA-201ENST00000340541 TRIM45Q9H8W5 580 aaPredicted RBP14.32□□□□□ -0.12
VAPA-201ENST00000340541 ANKRD10Q9NXR5 420 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 MID2Q9UJV3 735 aa14.32□□□□□ -0.12
VAPA-201ENST00000340541 A0A1B0GUH1 482 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 H3BQF6 201 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 PRAMEF2O60811 474 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 TRIM13O60858 407 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 NEURL1O76050 574 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 IGKV3-11P04433 115 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 STSP08842 583 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 ALOX15P16050 662 aaPredicted RBP14.31□□□□□ -0.12
VAPA-201ENST00000340541 COL8A1P27658 744 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 ALDH3A1P30838 453 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 TRHRP34981 398 aaPredicted RBP14.31□□□□□ -0.12
VAPA-201ENST00000340541 MAPK12P53778 367 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 RAE1P78406 368 aaKnown RBP14.31□□□□□ -0.12
VAPA-201ENST00000340541 HMGCS1Q01581 520 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 BIKQ13323 160 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 INAQ16352 499 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 TNFAIP8L3Q5GJ75 292 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 CFAP157Q5JU67 520 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 NDUFAF5Q5TEU4 345 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 OR52E8Q6IFG1 317 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 SCIMPQ6UWF3 145 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 ST13P4Q8IZP2 240 aaPredicted RBP14.31□□□□□ -0.12
VAPA-201ENST00000340541 PIP4P2Q8N4L2 257 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 C7orf57Q8NEG2 295 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 SLC2A12Q8TD20 617 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 ZNF721Q8TF20 911 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 THAP3Q8WTV1 239 aaPredicted RBP14.31□□□□□ -0.12
VAPA-201ENST00000340541 PPWD1Q96BP3 646 aaKnown RBP14.31□□□□□ -0.12
VAPA-201ENST00000340541 TM4SF18Q96CE8 201 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 APIPQ96GX9 242 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 DGAT2Q96PD7 388 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 ZIM3Q96PE6 472 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 SMC6Q96SB8 1091 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 UTP23Q9BRU9 249 aaKnown RBP14.31□□□□□ -0.12
VAPA-201ENST00000340541 MECRQ9BV79 373 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 OR8D2Q9GZM6 311 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 IQCGQ9H095 443 aaKnown RBP14.31□□□□□ -0.12
VAPA-201ENST00000340541 NMRK1Q9NWW6 199 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 ABI3Q9P2A4 366 aa14.31□□□□□ -0.12
VAPA-201ENST00000340541 SVILO95425 2214 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 ARHGAP10A1A4S6 786 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 HRKO00198 91 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 CDK2AP1O14519 115 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 LRRTM2O43300 516 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 ZFAND5O76080 213 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 TNNI3P19429 210 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 SERPINB3P29508 390 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 DEKP35659 375 aaKnown RBP14.3□□□□□ -0.12
VAPA-201ENST00000340541 ETV4P43268 484 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 PLIN5Q00G26 463 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 OR1C1Q15619 314 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 ZNF324BQ6AW86 544 aaPredicted RBP14.3□□□□□ -0.12
VAPA-201ENST00000340541 SPINK14Q6IE38 97 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 FAM180AQ6UWF9 173 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 C16orf47Q6ZP98 133 aaPredicted RBP14.3□□□□□ -0.12
VAPA-201ENST00000340541 MMP21Q8N119 569 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 BCORP1Q8N888 145 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 SCMH1Q96GD3 660 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 SENP5Q96HI0 755 aaPredicted RBP14.3□□□□□ -0.12
VAPA-201ENST00000340541 SLX1AQ9BQ83 275 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 HES7Q9BYE0 225 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 SHCBP1LQ9BZQ2 653 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 WDR41Q9HAD4 459 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 CES1P1Q9UKY3 287 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 CCL27Q9Y4X3 112 aa14.3□□□□□ -0.12
VAPA-201ENST00000340541 PCDHGB6Q9Y5F9 930 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms