RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SERPINB4P48594 390 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 ALDH9A1P49189 494 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 FOXK1P85037 733 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 CLEC6AQ6EIG7 209 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 FAM180AQ6UWF9 173 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 AMER2Q8N7J2 671 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 CATSPER1Q8NEC5 780 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 OR5L2Q8NGL0 311 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 THAP3Q8WTV1 239 aaPredicted RBP17.88■□□□□ 0.45
SYNE4-202ENST00000340477 RIT1Q92963 219 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 CNPPD1Q9BV87 410 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 VPS4AQ9UN37 437 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 PCDHA9Q9Y5H5 950 aa17.88■□□□□ 0.45
SYNE4-202ENST00000340477 COPG1Q9Y678 874 aaKnown RBP17.88■□□□□ 0.45
SYNE4-202ENST00000340477 PRAMEF2O60811 474 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 WISP1O95388 367 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 SLC35E2P0CK97 266 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 GALNSP34059 522 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 CYB561P49447 251 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 MLF1P58340 268 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 TUBA3CQ13748 450 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 HEPACAMQ14CZ8 416 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 OR1C1Q15619 314 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 FAM219BQ5XKK7 198 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 TUBA3EQ6PEY2 450 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 ZCCHC23Q6ZST2 131 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 TRIM46Q7Z4K8 759 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 CISD2Q8N5K1 135 aaKnown RBP17.87■□□□□ 0.45
SYNE4-202ENST00000340477 TMEM156Q8N614 296 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 OR8K3Q8NH51 312 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 MIB2Q96AX9 1013 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 PPWD1Q96BP3 646 aaKnown RBP17.87■□□□□ 0.45
SYNE4-202ENST00000340477 KLHL29Q96CT2 875 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 APIPQ96GX9 242 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 FBXL20Q96IG2 436 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 EBPLQ9BY08 206 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 PFDN4Q9NQP4 134 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 GIMAP4Q9NUV9 329 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 ZNF780BQ9Y6R6 833 aa17.87■□□□□ 0.45
SYNE4-202ENST00000340477 GCN1Q92616 2671 aaKnown RBP17.87■□□□□ 0.45
SYNE4-202ENST00000340477 PYCARD-AS1I3L0S3 204 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 PGRMC2O15173 223 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 BIRC5O15392 142 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 DDAH2O95865 285 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 ANXA4P09525 319 aaPredicted RBP17.86■□□□□ 0.45
SYNE4-202ENST00000340477 DRD2P14416 443 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 ETV4P43268 484 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 SSR4P51571 173 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 GPR143P51810 404 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 XKP51811 444 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 SPRED3Q2MJR0 410 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 PRR30Q53SZ7 412 aaPredicted RBP17.86■□□□□ 0.45
SYNE4-202ENST00000340477 ARL13AQ5H913 290 aaPredicted RBP17.86■□□□□ 0.45
SYNE4-202ENST00000340477 ZNF766Q5HY98 468 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 SH2D4BQ5SQS7 431 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 KANK2Q63ZY3 851 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 RPUSD3Q6P087 351 aaKnown RBP17.86■□□□□ 0.45
SYNE4-202ENST00000340477 SLC48A1Q6P1K1 146 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 GALNT18Q6P9A2 607 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 GALNT12Q8IXK2 581 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 DDIASQ8IXT1 998 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 TMEM178AQ8NBL3 297 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 CDC26Q8NHZ8 85 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 FAM76AQ8TAV0 307 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 TMEM125Q96AQ2 219 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 ZBTB9Q96C00 473 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 TM4SF18Q96CE8 201 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 SNRNP40Q96DI7 357 aaKnown RBP17.86■□□□□ 0.45
SYNE4-202ENST00000340477 METTL2AQ96IZ6 378 aaKnown RBP17.86■□□□□ 0.45
SYNE4-202ENST00000340477 NPAS2Q99743 824 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 ANKRD10Q9NXR5 420 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 LRFN1Q9P244 771 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 DLGAP4Q9Y2H0 992 aa17.86■□□□□ 0.45
SYNE4-202ENST00000340477 YARS2Q9Y2Z4 477 aaKnown RBP17.86■□□□□ 0.45
SYNE4-202ENST00000340477 HELZ2Q9BYK8 2649 aaKnown RBP17.85■□□□□ 0.45
SYNE4-202ENST00000340477 ITGA10O75578 1167 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 ERAL1O75616 437 aaKnown RBP17.85■□□□□ 0.45
SYNE4-202ENST00000340477 HSPA4LO95757 839 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 CHRNGP07510 517 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 CPMP14384 443 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 PORP16435 677 aaPredicted RBP17.85■□□□□ 0.45
SYNE4-202ENST00000340477 ERVK-8P63133 956 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 KCNC4Q03721 635 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 ZNF763Q0D2J5 394 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 ZNF267Q14586 743 aaPredicted RBP17.85■□□□□ 0.45
SYNE4-202ENST00000340477 CASP8Q14790 479 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 NR6A1Q15406 480 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 IGFBP7Q16270 282 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 TNFAIP8L3Q5GJ75 292 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 HHATQ5VTY9 493 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 RNF111Q6ZNA4 994 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 RNF165Q6ZSG1 346 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 SLC29A4Q7RTT9 530 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 SAMD14Q8IZD0 417 aaPredicted RBP17.85■□□□□ 0.45
SYNE4-202ENST00000340477 CLYBLQ8N0X4 340 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 ARMC10Q8N2F6 343 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 FAM98AQ8NCA5 519 aaKnown RBP17.85■□□□□ 0.45
SYNE4-202ENST00000340477 GALNT11Q8NCW6 608 aa17.85■□□□□ 0.45
SYNE4-202ENST00000340477 SENP5Q96HI0 755 aaPredicted RBP17.85■□□□□ 0.45
SYNE4-202ENST00000340477 PKNOX2Q96KN3 472 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms