RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 DNAJC14Q6Y2X3 702 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 QSOX2Q6ZRP7 698 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 DEFB107AQ8IZN7 70 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 CLECL1Q8IZS7 167 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 OR8J3Q8NGG0 315 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 OR4A15Q8NGL6 344 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 MCUR1Q96AQ8 359 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 MIEF2Q96C03 454 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 ZNF681Q96N22 645 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 CGREF1Q99674 301 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 GPATCH1Q9BRR8 931 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 PELOQ9BRX2 385 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 YIPF2Q9BWQ6 316 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 PAIP1Q9H074 479 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 SLAMF7Q9NQ25 335 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 PRTFDC1Q9NRG1 225 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 NXT1Q9UKK6 140 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 AP3M1Q9Y2T2 418 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 GMEB1Q9Y692 573 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 SDK2Q58EX2 2172 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 C9J4A7 227 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 NVLO15381 856 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 FGF17O60258 216 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 B4GALT2O60909 372 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 DNAJC8O75937 253 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 C6orf47O95873 294 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 ATP1B1P05026 303 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 IFI6P09912 130 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 PORP16435 677 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 ETV5P41161 510 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 NCBP2P52298 156 aaKnown RBP eCLIP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 PSME3P61289 254 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 IGLV3-21P80748 117 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 STX4Q12846 297 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 SERTAD2Q14140 314 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 PRSS53Q2L4Q9 553 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 SPATS1Q496A3 300 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 C3orf38Q5JPI3 329 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 CPZQ66K79 652 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 ZNF517Q6ZMY9 492 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 BNC2Q6ZN30 1099 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 COX15Q7KZN9 410 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 OVCH1Q7RTY7 1134 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 ZC3H7AQ8IWR0 971 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 SCUBE1Q8IWY4 988 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 TMEM52Q8NDY8 209 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 UCN3Q969E3 161 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 ANKRD27Q96NW4 1050 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 INPP5KQ9BT40 448 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 RBCK1Q9BYM8 510 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 WDR54Q9H977 334 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 IL1RL2Q9HB29 575 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 LANCL2Q9NS86 450 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 SEMA3GQ9NS98 782 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 IFT80Q9P2H3 777 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 RAPGEFL1Q9UHV5 662 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 SATB2Q9UPW6 733 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 CORO2BQ9UQ03 480 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 PCDHGA7Q9Y5G6 932 aa13.66□□□□□ -0.22
NIPAL3-202ENST00000339255 TRBV5-3A0A0A0MS03 114 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 DNAJA2O60884 412 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 LDB3O75112 727 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 STK17BO94768 372 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 CD63P08962 238 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 SLC35E2P0CK97 266 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 ZNF28P17035 718 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 HOXB9P17482 250 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 SLC6A2P23975 617 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 FEN1P39748 380 aaKnown RBP13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 PLIN5Q00G26 463 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 HSPB3Q12988 150 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 BHLHB9Q6PI77 547 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 TMEM64Q6YI46 380 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 SUN3Q8TAQ9 357 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 PMEPA1Q969W9 287 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 ANKRD9Q96BM1 317 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 MOAP1Q96BY2 351 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 GLIPR2Q9H4G4 154 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 POLR1BQ9H9Y6 1135 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 SLC22A11Q9NSA0 550 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 VAPAQ9P0L0 249 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 SLAMF8Q9P0V8 285 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 CTSFQ9UBX1 484 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 PCDHB14Q9Y5E9 798 aa13.65□□□□□ -0.22
NIPAL3-202ENST00000339255 A0A1W2PNU3 283 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 CFAP73A6NFT4 308 aa13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 WASHC1A8K0Z3 465 aa13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 CDC123O75794 336 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 CPSF4O95639 269 aaKnown RBP13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 ABCB1P08183 1280 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 EFNA1P20827 205 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 GPC1P35052 558 aa13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 COL9A2Q14055 689 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 CAPRIN1Q14444 709 aaKnown RBP13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 RSPO4Q2I0M5 234 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 MINDY4Q4G0A6 757 aa13.64□□□□□ -0.23
NIPAL3-202ENST00000339255 NANOGP8Q6NSW7 305 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms