RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 C7orf57Q8NEG2 295 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 NUBPLQ8TB37 319 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 SLC22A8Q8TCC7 542 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 ANKRD9Q96BM1 317 aaPredicted RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 SENP5Q96HI0 755 aaPredicted RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 DGAT2Q96PD7 388 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 GPATCH1Q9BRR8 931 aaKnown RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 ERP44Q9BS26 406 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 MS4A8Q9BY19 250 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 CLEC4MQ9H2X3 399 aaPredicted RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 SAYSD1Q9NPB0 183 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 GRHL1Q9NZI5 618 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 WHRNQ9P202 907 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 ST6GALNAC2Q9UJ37 374 aa14.41□□□□□ -0.1
LINC01116-202ENST00000339037 BOKQ9UMX3 212 aaPredicted RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 MTO1Q9Y2Z2 717 aaKnown RBP14.41□□□□□ -0.1
LINC01116-202ENST00000339037 FGF17O60258 216 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 SCELO95171 688 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 IGKV3-11P04433 115 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 CCDC166P0CW27 439 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 CPN2P22792 545 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 PEX19P40855 299 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 SSR2P43308 183 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 STT3AP46977 705 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 TBL3Q12788 808 aaKnown RBP14.4□□□□□ -0.1
LINC01116-202ENST00000339037 CHIT1Q13231 466 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 SNTB1Q13884 538 aaKnown RBP14.4□□□□□ -0.1
LINC01116-202ENST00000339037 TBCCQ15814 346 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 AP5B1Q2VPB7 878 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 PRAMEF20Q5VT98 475 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 C17orf53Q8N3J3 647 aaPredicted RBP14.4□□□□□ -0.1
LINC01116-202ENST00000339037 PDPRQ8NCN5 879 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 SPATA4Q8NEY3 305 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 PAQR8Q8TEZ7 354 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 PYROXD1Q8WU10 500 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 RNF166Q96A37 237 aaPredicted RBP14.4□□□□□ -0.1
LINC01116-202ENST00000339037 SPACA9Q96E40 222 aaPredicted RBP14.4□□□□□ -0.1
LINC01116-202ENST00000339037 TSPAN17Q96FV3 270 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 RMND5BQ96G75 393 aaPredicted RBP14.4□□□□□ -0.1
LINC01116-202ENST00000339037 SH2D2AQ9NP31 389 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 ZFP64Q9NPA5 681 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 ZNF358Q9NW07 568 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 CD274Q9NZQ7 290 aa14.4□□□□□ -0.1
LINC01116-202ENST00000339037 TCRBV9S1A1TA0A576 114 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 FAM187AA6NFU0 413 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 PHGDHO43175 533 aaKnown RBP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 CCNT2O60583 730 aaKnown RBP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 SH3BGRLO75368 114 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 C1QAP02745 245 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 S100BP04271 92 aaPredicted RBP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 RFPL3SP0C7P2 107 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 CD1DP15813 335 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 EPORP19235 508 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 KLK2P20151 261 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 UQCRC1P31930 480 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 ATP6V0D1P61421 351 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 IGLV3-21P80748 117 aaPredicted RBP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 PLIN5Q00G26 463 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 CALCOCO2Q13137 446 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 OR4D1Q15615 310 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 CEBPEQ15744 281 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 CHSY3Q70JA7 882 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 LRRC70Q7Z2Q7 622 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 OR4N5Q8IXE1 308 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 ULK2Q8IYT8 1036 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 DND1Q8IYX4 353 aaKnown RBP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 LRRC25Q8N386 305 aaPredicted RBP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 FBXW8Q8N3Y1 598 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 SLC15A4Q8N697 577 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 FAM13CQ8NE31 585 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 ZNF473Q8WTR7 871 aaKnown RBP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 UBE2E3Q969T4 207 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 RBM18Q96H35 190 aaKnown RBP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 FBXL20Q96IG2 436 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 ART5Q96L15 291 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 RBBP8Q99708 897 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 PHACTR1Q9C0D0 580 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 LIME1Q9H400 295 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 RASSF1Q9NS23 344 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 MS4A12Q9NXJ0 267 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 CRIM1Q9NZV1 1036 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 TXNDC16Q9P2K2 825 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 PTBP2Q9UKA9 531 aaKnown RBP14.39□□□□□ -0.11
LINC01116-202ENST00000339037 RNF112Q9ULX5 631 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 EDARQ9UNE0 448 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 PCDHGB3Q9Y5G1 929 aa14.39□□□□□ -0.11
LINC01116-202ENST00000339037 NSD1Q96L73 2696 aaPredicted RBP14.38□□□□□ -0.11
LINC01116-202ENST00000339037 LRRC3CA6NJW4 275 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 HSPB2A8KAH6 182 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 HRKO00198 91 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 SAP18O00422 153 aaKnown RBP14.38□□□□□ -0.11
LINC01116-202ENST00000339037 EIF3HO15372 352 aaKnown RBP eCLIP14.38□□□□□ -0.11
LINC01116-202ENST00000339037 PCNAP12004 261 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 BMP5P22003 454 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 GMPRP36959 345 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 CASP2P42575 452 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 HSPB2Q16082 182 aa14.38□□□□□ -0.11
LINC01116-202ENST00000339037 KHDRBS2Q5VWX1 349 aaKnown RBP14.38□□□□□ -0.11
LINC01116-202ENST00000339037 MED27Q6P2C8 311 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms