RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 FAM58BPP0C7Q3 252 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 PIK3CBP42338 1070 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 MAGEA5P43359 124 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 HERVK_113P63132 956 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 ERVK-8P63133 956 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 PMPCAQ10713 525 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 FOXO1Q12778 655 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 RTL4Q6ZR62 310 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 FAM47EQ6ZV65 393 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 MMGT1Q8N4V1 131 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 L3MBTL4Q8NA19 623 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 OR5L2Q8NGL0 311 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 SLC44A1Q8WWI5 657 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 TANKQ92844 425 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 ATP6V1E2Q96A05 226 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 CNPPD1Q9BV87 410 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 ERVK-6Q9BXR3 956 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 PROK2Q9HC23 129 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 PLSCR2Q9NRY7 297 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 PNPLA3Q9NST1 481 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 ERVK-19Q9WJR5 959 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 SPACA6W5XKT8 324 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 AKAP9Q99996 3911 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 NKX2-6A6NCS4 301 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 GLSO94925 669 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 CLDN9O95484 217 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 SBK3P0C264 359 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 CT62P0C5K7 136 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 ALOX15P16050 662 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 AGAP20933 346 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 ECHS1P30084 290 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 ARL1P40616 181 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 SERPINB8P50452 374 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 CDH13P55290 713 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 NUP107P57740 925 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 CKAP4Q07065 602 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 ZNF791Q3KP31 576 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 PRAMEF20Q5VT98 475 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 ADGRD1Q6QNK2 874 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 GPALPP1Q8IXQ4 340 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 MMP21Q8N119 569 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 ZCCHC7Q8N3Z6 543 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 TMEM151AQ8N4L1 468 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 OR5M3Q8NGP4 307 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 OR8K3Q8NH51 312 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 FAM173AQ9BQD7 235 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 DDX31Q9H8H2 851 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 FARSBQ9NSD9 589 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 TEX10Q9NXF1 929 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 ADGRE2Q9UHX3 823 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 RNF6Q9Y252 685 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 CACNA1CQ13936 2221 aa12.34□□□□□ -0.43
NUDCD3-201ENST00000338427 ENO4A6NNW6 628 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 TRIM49D1C9J1S8 452 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 AIFM1O95831 613 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 KLK1P06870 262 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 POU3F2P20265 443 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 SERPINB1P30740 379 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 TLX1P31314 330 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 SSTR4P31391 388 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 PHBP35232 272 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 MAGEA12P43365 314 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 MPEG1Q2M385 716 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 ZNF585AQ6P3V2 769 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 OPN5Q6U736 354 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 CYP20A1Q6UW02 462 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 CA5BP1Q8WTZ4 195 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 PHF10Q8WUB8 498 aaKnown RBP12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 DCAKDQ8WVC6 231 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 LURAP1Q96LR2 239 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 GAL3ST4Q96RP7 486 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 PAFAH2Q99487 392 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 FUT8Q9BYC5 575 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 MRPL1Q9BYD6 325 aaKnown RBP12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 ZDHHC11Q9H8X9 412 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 SACM1LQ9NTJ5 587 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 ALKBH4Q9NXW9 302 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 COPS7AQ9UBW8 275 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 PHF11Q9UIL8 331 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 PCTPQ9UKL6 214 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 ITGB1BP2Q9UKP3 347 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 TSC22D4Q9Y3Q8 395 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 NCKAP5O14513 1909 aa12.33□□□□□ -0.44
NUDCD3-201ENST00000338427 CSMD2Q7Z408 3487 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 IQANK1A0A1B0GTG1 560 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 FAM90A27PA6NNH2 459 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 OR10H2O60403 315 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 P04436 131 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 INHBAP08476 426 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 COX7A2P14406 83 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 CCNG1P51959 295 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 SLC37A1P57057 533 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 TRAF3Q13114 568 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 CUL3Q13618 768 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 SLC10A1Q14973 349 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 WHAMMP3Q1A5X7 153 aa12.32□□□□□ -0.44
NUDCD3-201ENST00000338427 TEX35Q5T0J7 233 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms