RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 NFKBIDQ8NI38 313 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 FKBP10Q96AY3 582 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 IFT27Q9BW83 186 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 CERS4Q9HA82 394 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 FBXL21Q9UKT6 434 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 DOT1LQ8TEK3 1739 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 NUP188Q5SRE5 1749 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 LAMB4A4D0S4 1761 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 COL18A1P39060 1754 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 STMND1H3BQB6 276 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 TLR4O00206 839 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 INPPL1O15357 1258 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 GMFGO60234 142 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 MATN4O95460 622 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 PAHP00439 452 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 CDK1P06493 297 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 ARSBP15848 533 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 CSNK2A2P19784 350 aaPredicted RBP15.39■□□□□ 0.05
NPHP3-201ENST00000337331 UGT2B10P36537 528 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 PREPP48147 710 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 ZMAT1Q5H9K5 638 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 USP51Q70EK9 711 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 OR52B6Q8NGF0 335 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 NETO1Q8TDF5 533 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 SCAMP4Q969E2 229 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 TAS2R16Q9NYV7 291 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 TAC3Q9UHF0 121 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 MUTYHQ9UIF7 546 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 LEUTXA8MZ59 168 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 SOX14O95416 240 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 GNRH1P01148 92 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 CBSLP0DN79 551 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 CBSP35520 551 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 GATAD2BQ8WXI9 593 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 ARL6Q9H0F7 186 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 VAPAQ9P0L0 249 aa15.39■□□□□ 0.05
NPHP3-201ENST00000337331 SLC35F4A4IF30 521 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 PTGESO14684 152 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 PDCD5O14737 125 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 TFPIP10646 304 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 APEX1P27695 318 aaKnown RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 FAUP35544 74 aaKnown RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 KHKP50053 298 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 CLCNKAP51800 687 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 FCN2Q15485 313 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 PM20D1Q6GTS8 502 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 ELP2Q6IA86 826 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 PSAPL1Q6NUJ1 521 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 TMIGD1Q6UXZ0 262 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 RNASE11Q8TAA1 199 aaKnown RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 TFGQ92734 400 aaPredicted RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 PRMT8Q9NR22 394 aaPredicted RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 SH3D21A4FU49 640 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 EEF1E1O43324 174 aaKnown RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 ERI3O43414 337 aaKnown RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 RPS13P62277 151 aaKnown RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 FAM189BP81408 668 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 NFATC2Q13469 925 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 NTRK2Q16620 822 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 ALG11Q2TAA5 492 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 COQ5Q5HYK3 327 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 ZCCHC12Q6PEW1 402 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 SLC46A3Q7Z3Q1 461 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 TMC8Q8IU68 726 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 AQP11Q8NBQ7 271 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 HERVK_113Q902F9 699 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 NUS1Q96E22 293 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 ELMOD3Q96FG2 381 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 C5orf34Q96MH7 638 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 GPR78Q96P69 363 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 FEVQ99581 238 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 CCM2Q9BSQ5 444 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 TMEM168Q9H0V1 697 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 DAPL1A0PJW8 107 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 FAM25EA8MYX2 175 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 CLDN4O14493 209 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 ANKRD28O15084 1053 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 MPIP34949 423 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 CCR8P51685 355 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 PGDP52209 483 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 FADDQ13158 208 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 LRRC32Q14392 662 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 BAK1Q16611 211 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 FAM219BQ5XKK7 198 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 SUSD1Q6UWL2 747 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 RANBP10Q6VN20 620 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 BOLLQ8N9W6 283 aaKnown RBP15.38■□□□□ 0.05
NPHP3-201ENST00000337331 CMTM7Q96FZ5 175 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 TMED9Q9BVK6 235 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 NDUFAF4Q9P032 175 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 SRRDQ9UH36 339 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 MSRAQ9UJ68 235 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 OR2A25A4D2G3 310 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 B4DXG7 233 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 XKRYO14609 159 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 SULT1B1O43704 296 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 PTHP01270 115 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 STATHP02808 62 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 ALPPP05187 535 aa15.38■□□□□ 0.05
NPHP3-201ENST00000337331 HRH2P25021 359 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms