RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SDR16C5Q8N3Y7 309 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 STARD5Q9NSY2 213 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 PCDHB14Q9Y5E9 798 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 PCDHGB1Q9Y5G3 927 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 C11orf98E9PRG8 122 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 AK1P00568 194 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 PRKAR1AP10644 381 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 PAX7P23759 505 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 MCATQ8IVS2 390 aaKnown RBP14.32□□□□□ -0.12
C9orf47-201ENST00000334490 TMEM151BQ8IW70 566 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 THEM6Q8WUY1 208 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 FCGR1BQ92637 280 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 NKD1Q969G9 470 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 ELSPBP1Q96BH3 223 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 MSANTD3Q96H12 275 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 SERINC2Q96SA4 455 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 DOHHQ9BU89 302 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 PDCD10Q9BUL8 212 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF717Q9BY31 904 aaPredicted RBP14.32□□□□□ -0.12
C9orf47-201ENST00000334490 ALOXE3Q9BYJ1 711 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 ADAMTS6Q9UKP5 1117 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 MGAT4BQ9UQ53 548 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 SYNGR4O95473 234 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF888P0CJ79 500 aaPredicted RBP14.32□□□□□ -0.12
C9orf47-201ENST00000334490 ETFAP13804 333 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF20P17024 532 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 FUT4P22083 530 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 FAUP35544 74 aaKnown RBP14.32□□□□□ -0.12
C9orf47-201ENST00000334490 SLC9A3P48764 834 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 NPTX1Q15818 432 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF77Q15935 545 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 CES4AQ5XG92 561 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.32□□□□□ -0.12
C9orf47-201ENST00000334490 EID2Q8N6I1 236 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 TMEM168Q9H0V1 697 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 COMMD9Q9P000 198 aa14.32□□□□□ -0.12
C9orf47-201ENST00000334490 WASHC1A8K0Z3 465 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 CDC40O60508 579 aaKnown RBP eCLIP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 RLN1P04808 185 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF33BQ06732 778 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF846Q147U1 533 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 TYSND1Q2T9J0 566 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 UGT3A2Q3SY77 523 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 WASH2PQ6VEQ5 465 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 LARP4Q71RC2 724 aaKnown RBP eCLIP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF534Q76KX8 674 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 OR51A7Q8NH64 312 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 STON2Q8WXE9 905 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 ASB11Q8WXH4 323 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 LOC100130705A0A1B0GUX0 176 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 VSTM5A8MXK1 200 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 SNNO75324 88 aaPredicted RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 C1orf105O95561 183 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 MAP3K8P41279 467 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 DPP6P42658 865 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 EMP2P54851 167 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 SEMA3BQ13214 749 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 SERTAD2Q14140 314 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 WSCD2Q2TBF2 565 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 HSF5Q4G112 596 aaPredicted RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 LIN52Q52LA3 116 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 COLEC12Q5KU26 742 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 IKBIPQ70UQ0 350 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 OR6C4Q8NGE1 309 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 CNDP2Q96KP4 475 aaKnown RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 POLDIP3Q9BY77 421 aaKnown RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 SLC6A17Q9H1V8 727 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 VILLO15195 856 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 AQP9O43315 295 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 DBIP07108 87 aaKnown RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 IL12AP29459 219 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 PRDX3P30048 256 aaKnown RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 ALDH3A2P51648 485 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 TUBB3Q13509 450 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 SPATC1Q76KD6 591 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 TMPRSS9Q7Z410 1059 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 OR2L5Q8NG80 312 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 EHD1Q9H4M9 534 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 THSD7AQ9UPZ6 1657 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 HOXC11O43248 304 aaPredicted RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 PENKP01210 267 aaPredicted RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 RPS17P08708 135 aaKnown RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 PGCP20142 388 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 HTR1EP28566 365 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 FOXA1P55317 472 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 BTBD16Q32M84 506 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 RAET1LQ5VY80 246 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 ADNP2Q6IQ32 1131 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 ARL9Q6T311 187 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 UBQLNLQ8IYU4 475 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 YIPF7Q8N8F6 280 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 OSTF1Q92882 214 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 OR1F2PQ96R84 312 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 INSM2Q96T92 566 aaPredicted RBP14.31□□□□□ -0.12
C9orf47-201ENST00000334490 DMRT3Q9NQL9 472 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 SRPK3Q9UPE1 567 aa14.31□□□□□ -0.12
C9orf47-201ENST00000334490 WBP4O75554 376 aaKnown RBP14.3□□□□□ -0.12
C9orf47-201ENST00000334490 FGF4P08620 206 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 CCNOP22674 350 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 MMP12P39900 470 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms