RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MMP12P39900 470 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 NNMTP40261 264 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 NTHL1P78549 312 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 PIN1Q13526 163 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 E2F2Q14209 437 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 REEP3Q6NUK4 255 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 FAM83HQ6ZRV2 1179 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF547Q8IVP9 402 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 LRRC56Q8IYG6 542 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 UBE2J2Q8N2K1 259 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 EFHD2Q96C19 240 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 TIFAQ96CG3 184 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 REPS1Q96D71 796 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 SGPP1Q9BX95 441 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 NLNQ9BYT8 704 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 LSM2Q9Y333 95 aaKnown RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 DSPPQ9NZW4 1301 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 FEZF1A0PJY2 475 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 PDZK1P1A8MUH7 402 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 C5orf58C9J3I9 102 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 FOXE1O00358 373 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 PLPP1O14494 284 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 PLD2O14939 933 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 LILRB5O75023 590 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 FHP07954 510 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 CRYBB2P43320 205 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 EPHA5P54756 1037 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF79Q15937 498 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF658BQ4V348 819 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 AGAP6Q5VW22 663 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 TMC5Q6UXY8 1006 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 KLHDC8AQ8IYD2 350 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 OR5D16Q8NGK9 328 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 OR5AR1Q8NGP9 310 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 OR9A1PQ8NGU1 263 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 ING5Q8WYH8 240 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 EXOSC8Q96B26 276 aaKnown RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 AGAP4Q96P64 663 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 EFCAB11Q9BUY7 163 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 UCK2Q9BZX2 261 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 ZDHHC4Q9NPG8 344 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 TVP23BQ9NYZ1 205 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 CNOT2Q9NZN8 540 aaKnown RBP11.7□□□□□ -0.54
VPS33B-201ENST00000333371 MKLN1Q9UL63 735 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 CARD8Q9Y2G2 431 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 V9GYH0 126 aa11.7□□□□□ -0.54
VPS33B-201ENST00000333371 ATG2BQ96BY7 2078 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 HEPACAM2A8MVW5 462 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 M0R3H8 397 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 PPM1DO15297 605 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 MOSPD3O75425 235 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 CYP17A1P05093 508 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 SCG5P05408 212 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 EPCAMP16422 314 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 PSMB5P28074 263 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 RFX2P48378 723 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 MANFP55145 182 aaKnown RBP11.69□□□□□ -0.54
VPS33B-201ENST00000333371 DEFA1P59665 94 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 DEFA3P59666 94 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 DAB2P98082 770 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF91Q05481 1191 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 PCDH1Q08174 1060 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 TARDBPQ13148 414 aaKnown RBP eCLIP11.69□□□□□ -0.54
VPS33B-201ENST00000333371 SPHARQ15513 63 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 ZNF805Q5CZA5 627 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 HIST2H2AA3Q6FI13 130 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 ERAP2Q6P179 960 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 DPPA4Q7L190 304 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 AMER3Q8N944 861 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 C9orf43Q8TAL5 461 aaPredicted RBP11.69□□□□□ -0.54
VPS33B-201ENST00000333371 SLC7A13Q8TCU3 470 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 FAM83CQ9BQN1 747 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 POLR2J2Q9GZM3 115 aaKnown RBP11.69□□□□□ -0.54
VPS33B-201ENST00000333371 MMP28Q9H239 520 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 CUEDC1Q9NWM3 386 aaPredicted RBP11.69□□□□□ -0.54
VPS33B-201ENST00000333371 KCND3Q9UK17 655 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 MAPRE3Q9UPY8 281 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 N6AMT1Q9Y5N5 214 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 SCN3AQ9NY46 2000 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 PRAMEF27A3QJZ7 478 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 SH3D21A4FU49 640 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 ANTXRLA6NF34 631 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 ANHXE9PGG2 379 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 SPINT1O43278 529 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 MFN2O95140 757 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 NTN1O95631 604 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 KRT75O95678 551 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 IFNA14P01570 189 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 APOA1P02647 267 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 OSMP13725 252 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 ETV6P41212 452 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 DGKGP49619 791 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 XKP51811 444 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 PNLIPRP1P54315 467 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 SYPL1Q16563 259 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 FLYWCH1Q4VC44 716 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 ATAD3CQ5T2N8 411 aa11.69□□□□□ -0.54
VPS33B-201ENST00000333371 GRASPQ7Z6J2 395 aaPredicted RBP11.69□□□□□ -0.54
VPS33B-201ENST00000333371 SPPL3Q8TCT6 385 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms