RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 AP1S1P61966 158 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 RPL6Q02878 288 aaKnown RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 HNRNPA0Q13151 305 aaKnown RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 MED22Q15528 200 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 TAF1AQ15573 450 aaPredicted RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 SLC14A2Q15849 920 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 ARHGAP15Q53QZ3 475 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 CARD16Q5EG05 197 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 XKR7Q5GH72 579 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 CLLU1OSQ5K130 101 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 AVPI1Q5T686 147 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 BCL2L15Q5TBC7 163 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 KCTD11Q693B1 232 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 ZNF549Q6P9A3 640 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 HAGHLQ6PII5 290 aaPredicted RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 WASH2PQ6VEQ5 465 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 CEP68Q76N32 757 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 TRMT11Q7Z4G4 463 aaKnown RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 CIR1Q86X95 450 aaPredicted RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 DENND1CQ8IV53 801 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 MFSD6LQ8IWD5 586 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 CCDC116Q8IYX3 515 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 ATPAF2Q8N5M1 289 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 OR9Q1Q8NGQ5 310 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 WDR20Q8TBZ3 569 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 CD99L2Q8TCZ2 262 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 KCNJ9Q92806 393 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 EXOSC8Q96B26 276 aaKnown RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 PHF21BQ96EK2 531 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 TEX37Q96LM6 180 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 SFXN2Q96NB2 322 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 PKMYT1Q99640 499 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 YIPF4Q9BSR8 244 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 SARGQ9BW04 601 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 GSDMCQ9BYG8 508 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 ZYG11BQ9C0D3 744 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 ALX4Q9H161 411 aaPredicted RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 TUBB1Q9H4B7 451 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 FAM124BQ9H5Z6 455 aaPredicted RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 GLOD4Q9HC38 313 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 HHATLQ9HCP6 504 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 MID1IP1Q9NPA3 183 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 C11orf16Q9NQ32 467 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 PRMT8Q9NR22 394 aaPredicted RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 NDUFB11Q9NX14 153 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 GPR83Q9NYM4 423 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 MED11Q9P086 117 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 PDP1Q9P0J1 537 aaPredicted RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 PLEKHB1Q9UF11 243 aaPredicted RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 SAMD4AQ9UPU9 718 aaKnown RBP7.15□□□□□ -1.26
TRIM49-201ENST00000329758 PCDHGA2Q9Y5H1 932 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 NUBP2Q9Y5Y2 271 aa7.15□□□□□ -1.26
TRIM49-201ENST00000329758 TRBV23-1A0A0A0MS06 115 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 A0A0U1RQF3 1178 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 A0A1W2PQH9 124 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 TCRBV16S1A1N1A0A5B0 115 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 UBE2CO00762 179 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 PHYHO14832 338 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 DPM1O60762 260 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 LILRB5O75023 590 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 GJB3O75712 270 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 POP7O75817 140 aaKnown RBP7.15□□□□□ -1.27
TRIM49-201ENST00000329758 HRGP04196 525 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 HAPLN1P10915 354 aaPredicted RBP7.15□□□□□ -1.27
TRIM49-201ENST00000329758 RHCEP18577 417 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 VAMP1P23763 118 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 NMBRP28336 390 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 SCNN1AP37088 669 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 CRYBB2P43320 205 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 PIK3CGP48736 1102 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 AGFG1P52594 562 aaKnown RBP7.15□□□□□ -1.27
TRIM49-201ENST00000329758 PLK1P53350 603 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 RAG2P55895 527 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 SH3BP2P78314 561 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 MC2RQ01718 297 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 DSC2Q02487 901 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 CDH18Q13634 790 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 PAFAH1B3Q15102 231 aaKnown RBP7.15□□□□□ -1.27
TRIM49-201ENST00000329758 TCTN1Q2MV58 587 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 KLHL26Q53HC5 615 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 DGKKQ5KSL6 1271 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 HACD4Q5VWC8 232 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 ABI3BPQ7Z7G0 1075 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 SCD5Q86SK9 330 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 TMEM17Q86X19 198 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 SKA3Q8IX90 412 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 PDZD9Q8IXQ8 264 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 SLC43A2Q8N370 569 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 PGBD5Q8N414 524 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 ZNF454Q8N9F8 522 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 IPMKQ8NFU5 416 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 TMEM163Q8TC26 289 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 ZDHHC1Q8WTX9 485 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 CPNE4Q96A23 557 aaPredicted RBP7.15□□□□□ -1.27
TRIM49-201ENST00000329758 THUMPD1Q9NXG2 353 aaKnown RBP7.15□□□□□ -1.27
TRIM49-201ENST00000329758 SEC14L3Q9UDX4 400 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 BTNL2Q9UIR0 455 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 PPIEQ9UNP9 301 aaKnown RBP7.15□□□□□ -1.27
TRIM49-201ENST00000329758 ASB1Q9Y576 335 aa7.15□□□□□ -1.27
TRIM49-201ENST00000329758 PTGDR2Q9Y5Y4 395 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms