RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 LACC1Q8IV20 430 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 OR2L2Q8NH16 312 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 CXorf40AQ8TE69 158 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 KLK6Q92876 244 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 WDR34Q96EX3 536 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 PDXPQ96GD0 296 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 PSD2Q9BQI7 771 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 ANKHQ9HCJ1 492 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 PCDHGB6Q9Y5F9 930 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 PEX16Q9Y5Y5 336 aa13.34□□□□□ -0.27
ATP2C1-201ENST00000328560 TAF4O00268 1085 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 KIAA0355O15063 1070 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 TLX2O43763 284 aaPredicted RBP13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 SSX4O60224 188 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 KCNK2O95069 426 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 PCDH8O95206 1070 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 CLCNKAP51800 687 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 SELENBP1Q13228 472 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 EIF4HQ15056 248 aaKnown RBP13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 CCBE1Q6UXH8 406 aaPredicted RBP13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 OR4D11Q8NGI4 311 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 OR5P2Q8WZ92 322 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 MTERF3Q96E29 417 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 C17orf62Q9BQA9 187 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 FAM83CQ9BQN1 747 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 LGR4Q9BXB1 951 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 ASPNQ9BXN1 380 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 MARCH7Q9H992 704 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 ANKMY1Q9P2S6 941 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 ENOPH1Q9UHY7 261 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 AP1M2Q9Y6Q5 423 aa13.33□□□□□ -0.27
ATP2C1-201ENST00000328560 PDZK1P1A8MUH7 402 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 TMPRSS11DO60235 418 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 SEMA7AO75326 666 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 NME6O75414 186 aaPredicted RBP13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 NFATC1O95644 943 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 CISD3P0C7P0 127 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 SSX1Q16384 188 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF181Q2M3W8 571 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 PNCKQ6P2M8 343 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 UNC5DQ6UXZ4 953 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 AKAP14Q86UN6 197 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 FBXO15Q8NCQ5 510 aaPredicted RBP13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 SPPL3Q8TCT6 385 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 SMPDL3AQ92484 453 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 RSPO3Q9BXY4 272 aaPredicted RBP13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 POLR2J2Q9GZM3 115 aaKnown RBP13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 CHD7Q9P2D1 2997 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 CAPN5O15484 640 aaPredicted RBP13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 B4GALT2O60909 372 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 MFN2O95140 757 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 PAPLNO95428 1278 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 APOA1P02647 267 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 OSMP13725 252 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 PCYT1AP49585 367 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 HMGA2P52926 109 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 EPHA5P54756 1037 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF45Q02386 682 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 KCNJ8Q15842 424 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 TIMM50Q3ZCQ8 353 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 C9orf64Q5T6V5 341 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 DCUN1D3Q8IWE4 304 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 C9orf43Q8TAL5 461 aaPredicted RBP13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF514Q96K75 400 aaPredicted RBP13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 PRR14Q9BWN1 585 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 OR52A5Q9H2C5 316 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 EPHX3Q9H6B9 360 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 MVB12BQ9H7P6 319 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 ZCCHC3Q9NUD5 404 aaKnown RBP13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 WDR70Q9NW82 654 aa13.33□□□□□ -0.28
ATP2C1-201ENST00000328560 OTOL1A6NHN0 477 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 PSMD11O00231 422 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 UGT2B17O75795 530 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 ELAVL4P26378 380 aaKnown RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 BUD31P41223 144 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 SSR2P43308 183 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 LIMS1P48059 325 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 PXNP49023 591 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 E2F2Q14209 437 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 ATAD3BQ5T9A4 648 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 LIPKQ5VXJ0 399 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 KIAA0907Q7Z7F0 614 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 FAM129CQ86XR2 697 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 CELF2-AS1Q8N7Q2 184 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC7A13Q8TCU3 470 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 SETD7Q8WTS6 366 aaKnown RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 KLHL6Q8WZ60 621 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 BADQ92934 168 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 NEURL3Q96EH8 262 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 CDH23Q9H251 3354 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 NOTCH4Q99466 2003 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 ISPDA4D126 451 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 ASNA1O43681 348 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 MPZL2O60487 215 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 TBX6O95947 436 aaPredicted RBP13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 C8orf89P0DMQ9 161 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 ITGB7P26010 798 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 OPRD1P41143 372 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 GJA8P48165 433 aa13.32□□□□□ -0.28
ATP2C1-201ENST00000328560 DEFA1P59665 94 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms