RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 GLYATL1P3A0A0U1RQE8 302 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 POM121CA8CG34 1229 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 GABRR3A8MPY1 467 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 GOLGA8RI6L899 631 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 AURKAO14965 403 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 DSCR3O14972 297 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 KMOO15229 486 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 RPS17P08708 135 aaKnown RBP6.15□□□□□ -1.42
CSTF3-201ENST00000323959 TPBGLP0DKB5 382 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 VCLP18206 1134 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 HERVK_113P63132 956 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 TMPRSS15P98073 1019 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 IRF9Q00978 393 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 RIPK1Q13546 671 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 E2F2Q14209 437 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 SETDB1Q15047 1291 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 BCL7AQ4VC05 210 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 RBM20Q5T481 1227 aaKnown RBP6.15□□□□□ -1.42
CSTF3-201ENST00000323959 CCDC116Q8IYX3 515 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 OTUD6BQ8N6M0 293 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 STAG3L4Q8TBR4 150 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 ZNF483Q8TF39 744 aaPredicted RBP6.15□□□□□ -1.42
CSTF3-201ENST00000323959 PTCD3Q96EY7 689 aaKnown RBP6.15□□□□□ -1.42
CSTF3-201ENST00000323959 ERVK-6Q9BXR3 956 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 MEAF6Q9HAF1 191 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 IL26Q9NPH9 171 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 ETAA1Q9NY74 926 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 FKBPLQ9UIM3 349 aa6.15□□□□□ -1.42
CSTF3-201ENST00000323959 PCYT1BQ9Y5K3 369 aaPredicted RBP6.15□□□□□ -1.42
CSTF3-201ENST00000323959 C3orf84H3BNL1 204 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 AQP7O14520 342 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 KIAA0513O60268 411 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 NDUFS3O75489 264 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 NEFHP12036 1026 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 RASSF2P50749 326 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 ALDH18A1P54886 795 aaKnown RBP6.15□□□□□ -1.43
CSTF3-201ENST00000323959 LDLRAP1Q5SW96 308 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 RAPH1Q70E73 1250 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 ABHD13Q7L211 337 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 TRIM74Q86UV6 250 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 CAMK1DQ8IU85 385 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 TMEM151BQ8IW70 566 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.15□□□□□ -1.43
CSTF3-201ENST00000323959 TCAIMQ8N3R3 496 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 FITM2Q8N6M3 262 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 ZNF418Q8TF45 676 aaPredicted RBP6.15□□□□□ -1.43
CSTF3-201ENST00000323959 NXNL1Q96CM4 212 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 LRRC37BQ96QE4 947 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 PANX3Q96QZ0 392 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 PAIP2Q9BPZ3 127 aaKnown RBP6.15□□□□□ -1.43
CSTF3-201ENST00000323959 CCDC106Q9BWC9 280 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 GATA5Q9BWX5 397 aaPredicted RBP6.15□□□□□ -1.43
CSTF3-201ENST00000323959 SOX17Q9H6I2 414 aaPredicted RBP6.15□□□□□ -1.43
CSTF3-201ENST00000323959 SLCO1B3Q9NPD5 702 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 BATF3Q9NR55 127 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 ZNF226Q9NYT6 803 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 DNMT3AQ9Y6K1 912 aaPredicted RBP6.15□□□□□ -1.43
CSTF3-201ENST00000323959 SCN2AQ99250 2005 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 EML6Q6ZMW3 1958 aa6.15□□□□□ -1.43
CSTF3-201ENST00000323959 NPIPB15A6NHN6 443 aaPredicted RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 TRPC5OSA6NMA1 111 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 A8MT66 165 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 NEURL1O76050 574 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 CYC1P08574 325 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 MTHFD2P13995 350 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 EZRP15311 586 aaKnown RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 ZNF8P17098 575 aaPredicted RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 PAX7P23759 505 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 NDUFS1P28331 727 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 SRP14P37108 136 aaKnown RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 MC3RP41968 323 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 SCTRP47872 440 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 GABRA4P48169 554 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 RPL14P50914 215 aaKnown RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 HNRNPFP52597 415 aaKnown RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 FOXL2P58012 376 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 PPP1R3AQ16821 1122 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 ZNF678Q5SXM1 525 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 CLNKQ7Z7G1 428 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 ADAMTSL2Q86TH1 951 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 FBXW8Q8N3Y1 598 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 OR6P1Q8NGX9 317 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 KCTD4Q8WVF5 259 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 RMDN2Q96LZ7 410 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 QRFPRQ96P65 431 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 TMEM120AQ9BXJ8 343 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 GPR63Q9BZJ6 419 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 C20orf27Q9GZN8 174 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 GSTO2Q9H4Y5 243 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 ASB8Q9H765 288 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 CAB39LQ9H9S4 337 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 XPR1Q9UBH6 696 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 METRNQ9UJH8 293 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 PRKAB1Q9Y478 270 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 OARD1Q9Y530 152 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 TNPO3Q9Y5L0 923 aaKnown RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 YLPM1P49750 1951 aaKnown RBP6.14□□□□□ -1.43
CSTF3-201ENST00000323959 HDAC3O15379 428 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 SMIM24O75264 130 aa6.14□□□□□ -1.43
CSTF3-201ENST00000323959 PIAS1O75925 651 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms