RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 TCEAL4Q96EI5 215 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 GOLGA2P5Q9HBQ8 144 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 NHSQ6T4R5 1651 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 NIPSNAP2O75323 286 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 RBBP9O75884 186 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 ARL3P36405 182 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 ASPGQ86U10 573 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 ZC3H3Q8IXZ2 948 aaKnown RBP12.12□□□□□ -0.47
FN1-201ENST00000323926 CMTM1Q8IZ96 169 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 DNAJC22Q8N4W6 341 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 TFAP2BQ92481 460 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.12□□□□□ -0.47
FN1-201ENST00000323926 ALKBH4Q9NXW9 302 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 TMA7Q9Y2S6 64 aaKnown RBP12.12□□□□□ -0.47
FN1-201ENST00000323926 REXO2Q9Y3B8 237 aaKnown RBP12.12□□□□□ -0.47
FN1-201ENST00000323926 DOCK11Q5JSL3 2073 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 WNK3Q9BYP7 1800 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 NKX3-2P78367 333 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 LASP1Q14847 261 aaKnown RBP12.12□□□□□ -0.47
FN1-201ENST00000323926 OR2T4Q8NH00 348 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 WDR92Q96MX6 357 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 RIOK2Q9BVS4 552 aaKnown RBP12.12□□□□□ -0.47
FN1-201ENST00000323926 ABRACLQ9P1F3 81 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 FAM170BA6NMN3 283 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 SCAF4O95104 1147 aaKnown RBP12.12□□□□□ -0.47
FN1-201ENST00000323926 ZNF182P17025 639 aaPredicted RBP12.12□□□□□ -0.47
FN1-201ENST00000323926 GRK1Q15835 563 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 UGT3A2Q3SY77 523 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 UMODL1-AS1Q8N2C9 162 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 C1orf52Q8N6N3 182 aaKnown RBP12.12□□□□□ -0.47
FN1-201ENST00000323926 IMP4Q96G21 291 aaKnown RBP12.12□□□□□ -0.47
FN1-201ENST00000323926 ZDHHC18Q9NUE0 388 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 TRIOBPQ9H2D6 2365 aa12.12□□□□□ -0.47
FN1-201ENST00000323926 DOCK9Q9BZ29 2069 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 CASC3O15234 703 aaKnown RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 CNTN5O94779 1100 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 FBLP22087 321 aaKnown RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 TMEM115Q12893 351 aaPredicted RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 HSH2DQ96JZ2 352 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 CCM2LQ9NUG4 571 aaPredicted RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 SLC35A3Q9Y2D2 325 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 A0A1W2PRU2 124 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 TOR1AO14656 332 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 POLR1CO15160 346 aaPredicted RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 TGFB1P01137 390 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 RETP07949 1114 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 AMZ1Q400G9 498 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 UBE2Q1Q7Z7E8 422 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 ARL14Q8N4G2 192 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 MYRFLQ96LU7 910 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 M0R036 132 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 DRD1P21728 446 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 VAMP1P23763 118 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 TRA2BP62995 288 aaKnown RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 UPP1Q16831 310 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 C5orf46Q6UWT4 87 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 ZNF704Q6ZNC4 412 aaPredicted RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 FUZQ9BT04 418 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 SLC7A8Q9UHI5 535 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 ZNF175Q9Y473 711 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 A0A075B6Q4 140 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 PITPNBP48739 271 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 DAP3P51398 398 aaKnown RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 TSPAN33Q86UF1 283 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 THAP4Q8WY91 577 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 TMBIM1Q969X1 311 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 HPF1Q9NWY4 346 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 UCKL1Q9NWZ5 548 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 GSK3BP49841 420 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 ADAM17P78536 824 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 KHDC1Q4VXA5 237 aaKnown RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 YKT6O15498 198 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 GMFGO60234 142 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 MAP2K4P45985 399 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 PROX2Q3B8N5 592 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 NOXRED1Q6NXP6 359 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 RNF111Q6ZNA4 994 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 SIX5Q8N196 739 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 P2RY13Q9BPV8 354 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 LOC102725191A0A1B0GVB3 256 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 TTC24A2A3L6 582 aaPredicted RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 ZBTB22O15209 634 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 FAM155BO75949 473 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 FGF18O76093 207 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 PRLP01236 227 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 HAPLN1P10915 354 aaPredicted RBP12.11□□□□□ -0.47
FN1-201ENST00000323926 ICAM2P13598 275 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 GPR176Q14439 515 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 ACTRT3Q9BYD9 372 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 CD84Q9UIB8 345 aa12.11□□□□□ -0.47
FN1-201ENST00000323926 SEC13P55735 322 aa12.1□□□□□ -0.47
FN1-201ENST00000323926 CMPK2Q5EBM0 449 aa12.1□□□□□ -0.47
FN1-201ENST00000323926 KLHL15Q96M94 604 aa12.1□□□□□ -0.47
FN1-201ENST00000323926 PRTFDC1Q9NRG1 225 aa12.1□□□□□ -0.47
FN1-201ENST00000323926 FAIMQ9NVQ4 179 aa12.1□□□□□ -0.47
FN1-201ENST00000323926 GPATCH2Q9NW75 528 aa12.1□□□□□ -0.47
FN1-201ENST00000323926 CNOT1A5YKK6 2376 aaKnown RBP12.1□□□□□ -0.47
FN1-201ENST00000323926 SPTBN2O15020 2390 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms