RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CLK4Q9HAZ1 481 aaKnown RBP20.08■□□□□ 0.81
ATG4D-201ENST00000309469 FAM118AQ9NWS6 357 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 KCMF1Q9P0J7 381 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 TMEFF2Q9UIK5 374 aaPredicted RBP20.08■□□□□ 0.81
ATG4D-201ENST00000309469 PHF11Q9UIL8 331 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 PSME2Q9UL46 239 aa20.08■□□□□ 0.81
ATG4D-201ENST00000309469 SEC24DO94855 1032 aaPredicted RBP20.08■□□□□ 0.8
ATG4D-201ENST00000309469 EIF2S1P05198 315 aaKnown RBP20.08■□□□□ 0.8
ATG4D-201ENST00000309469 BCHEP06276 602 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 MPIP34949 423 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 MAZP56270 477 aaKnown RBP20.08■□□□□ 0.8
ATG4D-201ENST00000309469 CEBPEQ15744 281 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 TTC23Q5W5X9 447 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 SZRD1Q7Z422 152 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF786Q8N393 782 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 SLC35G5Q96KT7 338 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 HSPA12BQ96MM6 686 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF681Q96N22 645 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 RUBCNLQ9H714 662 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 NDUFAF4Q9P032 175 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 NDUFA13Q9P0J0 144 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF780BQ9Y6R6 833 aa20.08■□□□□ 0.8
ATG4D-201ENST00000309469 SMIM31A0A1B0GVY4 71 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 ZSCAN9O15535 394 aaPredicted RBP20.07■□□□□ 0.8
ATG4D-201ENST00000309469 B3GALT2O43825 422 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 TNFRSF1BP20333 461 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 BUD31P41223 144 aaPredicted RBP20.07■□□□□ 0.8
ATG4D-201ENST00000309469 RUNX2Q13950 521 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 MANEAQ5SRI9 462 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.07■□□□□ 0.8
ATG4D-201ENST00000309469 ARMC8Q8IUR7 673 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 ARL14Q8N4G2 192 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 SFXN5Q8TD22 340 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 KLHL6Q8WZ60 621 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 TMEM19Q96HH6 336 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 MAGED4Q96JG8 741 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 MUS81Q96NY9 551 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 SEMA6CQ9H3T2 930 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 EPB41L1Q9H4G0 881 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 THUMPD1Q9NXG2 353 aaKnown RBP20.07■□□□□ 0.8
ATG4D-201ENST00000309469 C3orf18Q9UK00 162 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 POMT2Q9UKY4 750 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 DOLKQ9UPQ8 538 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 ARHGEF17Q96PE2 2063 aaPredicted RBP20.07■□□□□ 0.8
ATG4D-201ENST00000309469 TRIOO75962 3097 aa20.07■□□□□ 0.8
ATG4D-201ENST00000309469 A0A1W2PS29 197 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 ALPPL2P10696 532 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 ALOX12P18054 663 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF10P21506 573 aaPredicted RBP20.06■□□□□ 0.8
ATG4D-201ENST00000309469 CPN2P22792 545 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 PTGER1P34995 402 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 TNFRSF17Q02223 184 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 LAPTM4AQ15012 233 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 RFX4Q33E94 735 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 RPS26P11Q5JNZ5 115 aaPredicted RBP20.06■□□□□ 0.8
ATG4D-201ENST00000309469 SLC44A2Q8IWA5 706 aaPredicted RBP20.06■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF655Q8N720 491 aaPredicted RBP20.06■□□□□ 0.8
ATG4D-201ENST00000309469 AVL9Q8NBF6 648 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF555Q8NEP9 628 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 SPACA7Q96KW9 195 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 C10orf90Q96M02 699 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 ZNF347Q96SE7 839 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 AMBRA1Q9C0C7 1298 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 GRIP2Q9C0E4 1043 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 OR51I1Q9H343 314 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 ORC6Q9Y5N6 252 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 MDC1Q14676 2089 aaKnown RBP20.06■□□□□ 0.8
ATG4D-201ENST00000309469 OR12D1P0DN82 309 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 MATN1P21941 496 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 MAGEA8P43361 318 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 OR1E2P47887 323 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 RAD23AP54725 363 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 LIM2P55344 173 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 MAPK11Q15759 364 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 GPR19Q15760 415 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 KCTD21Q4G0X4 260 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 BHLHB9Q6PI77 547 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 METTL25Q8N6Q8 603 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 SMYD1Q8NB12 490 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 C1orf216Q8TAB5 229 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 MOAP1Q96BY2 351 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 EPYCQ99645 322 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 THSD1Q9NS62 852 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 PDP1Q9P0J1 537 aaPredicted RBP20.06■□□□□ 0.8
ATG4D-201ENST00000309469 MRPS2Q9Y399 296 aaKnown RBP20.06■□□□□ 0.8
ATG4D-201ENST00000309469 PCDHGB3Q9Y5G1 929 aa20.06■□□□□ 0.8
ATG4D-201ENST00000309469 PRAMEF25A6NGN4 478 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 DNAJB6O75190 326 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 C9P02748 559 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 FASLGP48023 281 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 PRKAG1P54619 331 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 NR1H2P55055 460 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 KCNAB2Q13303 367 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 ZC3H12BQ5HYM0 836 aaKnown RBP20.05■□□□□ 0.8
ATG4D-201ENST00000309469 GPR153Q6NV75 609 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 TMEM107Q6UX40 140 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 SLC36A4Q6YBV0 504 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 CYP4Z1Q86W10 505 aa20.05■□□□□ 0.8
ATG4D-201ENST00000309469 GEMIN6Q8WXD5 167 aaKnown RBP20.05■□□□□ 0.8
ATG4D-201ENST00000309469 TSC22D3Q99576 134 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms