RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 IGLV3-21P80748 117 aaPredicted RBP25.45■■□□□ 1.66
HDAC3-201ENST00000305264 RCAN2Q14206 197 aa25.45■■□□□ 1.66
HDAC3-201ENST00000305264 OR4F3Q6IEY1 312 aa25.45■■□□□ 1.66
HDAC3-201ENST00000305264 ZNF681Q96N22 645 aa25.45■■□□□ 1.66
HDAC3-201ENST00000305264 DUSP26Q9BV47 211 aa25.45■■□□□ 1.66
HDAC3-201ENST00000305264 CCDC106Q9BWC9 280 aa25.45■■□□□ 1.66
HDAC3-201ENST00000305264 GPN2Q9H9Y4 310 aaPredicted RBP25.45■■□□□ 1.66
HDAC3-201ENST00000305264 CAPN7Q9Y6W3 813 aa25.45■■□□□ 1.66
HDAC3-201ENST00000305264 NR5A2O00482 541 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 KIR3DL1P43629 444 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 XKP51811 444 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 SRSF6Q13247 344 aaKnown RBP25.44■■□□□ 1.66
HDAC3-201ENST00000305264 NSDHLQ15738 373 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 DPY19L1Q2PZI1 675 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 TIGD2Q4W5G0 525 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 BLOC1S3Q6QNY0 202 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 PLPP5Q8NEB5 264 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 LRRC37BQ96QE4 947 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 ALOXE3Q9BYJ1 711 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 MRGBPQ9NV56 204 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 ATAD3AQ9NVI7 634 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 ENTPD4Q9Y227 616 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 PDPK1O15530 556 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 ALOX12BO75342 701 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 LIFP15018 202 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 PTGER1P34995 402 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 SRSF11Q05519 484 aaKnown RBP25.44■■□□□ 1.66
HDAC3-201ENST00000305264 TREML1Q86YW5 311 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 OR8J2Q8NGG1 315 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 VPS33AQ96AX1 596 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 ERP27Q96DN0 273 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 TMEM121BQ9BXQ6 578 aaPredicted RBP25.44■■□□□ 1.66
HDAC3-201ENST00000305264 PCDHGA6Q9Y5G7 932 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 ZNF780BQ9Y6R6 833 aa25.44■■□□□ 1.66
HDAC3-201ENST00000305264 TCRBV16S1A1N1A0A5B0 115 aa25.43■■□□□ 1.66
HDAC3-201ENST00000305264 PGRP06401 933 aa25.43■■□□□ 1.66
HDAC3-201ENST00000305264 CPMP14384 443 aa25.43■■□□□ 1.66
HDAC3-201ENST00000305264 WNT3P56703 355 aa25.43■■□□□ 1.66
HDAC3-201ENST00000305264 CEBPEQ15744 281 aa25.43■■□□□ 1.66
HDAC3-201ENST00000305264 SUN3Q8TAQ9 357 aa25.43■■□□□ 1.66
HDAC3-201ENST00000305264 KIAA1143Q96AT1 154 aaPredicted RBP25.43■■□□□ 1.66
HDAC3-201ENST00000305264 BHLHE41Q9C0J9 482 aaPredicted RBP25.43■■□□□ 1.66
HDAC3-201ENST00000305264 GIMAP4Q9NUV9 329 aa25.43■■□□□ 1.66
HDAC3-201ENST00000305264 KCND3Q9UK17 655 aa25.43■■□□□ 1.66
HDAC3-201ENST00000305264 CAPN3P20807 821 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 S100A3P33764 101 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 SLC52A3Q9NQ40 469 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 TMEM45AQ9NWC5 275 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 IGF2RP11717 2491 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 MYO1GB0I1T2 1018 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 KCNK10P57789 538 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 IL10RAQ13651 578 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 LRRC25Q8N386 305 aaPredicted RBP25.42■■□□□ 1.66
HDAC3-201ENST00000305264 FITM2Q8N6M3 262 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 SNIP1Q8TAD8 396 aaKnown RBP25.42■■□□□ 1.66
HDAC3-201ENST00000305264 BBS4Q96RK4 519 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 FAM117AQ9C073 453 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 CCDC86Q9H6F5 360 aaKnown RBP25.42■■□□□ 1.66
HDAC3-201ENST00000305264 DKK4Q9UBT3 224 aa25.42■■□□□ 1.66
HDAC3-201ENST00000305264 ACACAQ13085 2346 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 SLC22A2O15244 555 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 IL6P05231 212 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 PORP16435 677 aaPredicted RBP25.41■■□□□ 1.66
HDAC3-201ENST00000305264 CSNK2A2P19784 350 aaPredicted RBP25.41■■□□□ 1.66
HDAC3-201ENST00000305264 ADSLP30566 484 aaPredicted RBP25.41■■□□□ 1.66
HDAC3-201ENST00000305264 NTSP30990 170 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 FRKP42685 505 aaPredicted RBP25.41■■□□□ 1.66
HDAC3-201ENST00000305264 VPS26BQ4G0F5 336 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 ANKRD46Q86W74 232 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 CCDC116Q8IYX3 515 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 KCNE4Q8WWG9 221 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 PPWD1Q96BP3 646 aaKnown RBP25.41■■□□□ 1.66
HDAC3-201ENST00000305264 SPDL1Q96EA4 605 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 SEMA3GQ9NS98 782 aa25.41■■□□□ 1.66
HDAC3-201ENST00000305264 SCN2BO60939 215 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 CYC1P08574 325 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 DDX5P17844 614 aaKnown RBP25.4■■□□□ 1.66
HDAC3-201ENST00000305264 NCBP2P52298 156 aaKnown RBP eCLIP25.4■■□□□ 1.661e-7■□□□□ 8.9
HDAC3-201ENST00000305264 SERTAD2Q14140 314 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 TMEM205Q6UW68 189 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 DGAT2L6Q6ZPD8 337 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 ANKRD37Q7Z713 158 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 ZNF248Q8NDW4 579 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 METTL21AQ8WXB1 218 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 C8orf44Q96CB5 159 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 AMDHD1Q96NU7 426 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 OR52E6Q96RD3 313 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 GLIPR2Q9H4G4 154 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 DMXL2Q8TDJ6 3036 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 NUP214P35658 2090 aaPredicted RBP25.4■■□□□ 1.66
HDAC3-201ENST00000305264 ASPDHA6ND91 283 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 SLC35E2P0CK97 266 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 STT3AP46977 705 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 PLIN5Q00G26 463 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 CPZQ66K79 652 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 ERMP1Q7Z2K6 904 aa25.4■■□□□ 1.66
HDAC3-201ENST00000305264 ZNF551Q7Z340 670 aaPredicted RBP25.4■■□□□ 1.66
HDAC3-201ENST00000305264 SAMD14Q8IZD0 417 aaPredicted RBP25.4■■□□□ 1.66
HDAC3-201ENST00000305264 ST13P4Q8IZP2 240 aaPredicted RBP25.4■■□□□ 1.66
HDAC3-201ENST00000305264 CLECL1Q8IZS7 167 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms