RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 GTF2IRD2BQ6EKJ0 949 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 CDHR3Q6ZTQ4 885 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 GTF2IRD2Q86UP8 949 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 LHFPL3Q86UP9 236 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 KBTBD6Q86V97 674 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 OR9A2Q8NGT5 310 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 OR5K1Q8NHB7 308 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 DENND1AQ8TEH3 1009 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 NECTIN4Q96NY8 510 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 NPY6RQ99463 290 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 PELOQ9BRX2 385 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF350Q9GZX5 532 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 REEP4Q9H6H4 257 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 TNFRSF19Q9NS68 423 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 GPR52Q9Y2T5 361 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 B3GALT1Q9Y5Z6 326 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 DHFRP00374 187 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 AFDNP55196 1824 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 RRP8O43159 456 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 CHP2O43745 196 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 CBSLP0DN79 551 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 CBSP35520 551 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 GNG2P59768 71 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 Q7L0L9 218 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 MRPL43Q8N983 215 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 LRRC57Q8N9N7 239 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 GNPDA2Q8TDQ7 276 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 PYURFQ96I23 114 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF347Q96SE7 839 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 DOHHQ9BU89 302 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 PAPOLGQ9BWT3 736 aaKnown RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 TSPAN10Q9H1Z9 355 aaPredicted RBP7.46□□□□□ -1.22
SCN9A-201ENST00000303354 HAO2Q9NYQ3 351 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 GRHL1Q9NZI5 618 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 PDE10AQ9Y233 779 aa7.46□□□□□ -1.22
SCN9A-201ENST00000303354 NEURL4Q96JN8 1562 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 TUBG1P23258 451 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 HOXD13P35453 343 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ARSDP51689 593 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 OR1D5P58170 312 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 PAFAH1B3Q15102 231 aaKnown RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 KIAA0895LQ68EN5 471 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 TRPV1Q8NER1 839 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 HUS1BQ8NHY5 278 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 SFXN2Q96NB2 322 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF700Q9H0M5 742 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 PCDHGB7Q9Y5F8 929 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 IGHV3-9P01782 118 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 PTAFRP25105 342 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 OR4D1Q15615 310 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 KHDC1Q4VXA5 237 aaKnown RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 SLC25A25Q6KCM7 469 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 RFLNAQ6ZTI6 216 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 TOR1AIP2Q8NFQ8 470 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 OR8H1Q8NGG4 311 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 OR4K13Q8NH42 304 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 WASF3Q9UPY6 502 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 IGHV3-20A0A0C4DH32 117 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 PDCD5O14737 125 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 FBXO45P0C2W1 286 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 CD36P16671 472 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 SGSHP51688 502 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 RCAN2Q14206 197 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 C9orf152Q5JTZ5 239 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 LARP4Q71RC2 724 aaKnown RBP eCLIP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 OR52E1Q8NGJ3 308 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 LRRC20Q8TCA0 184 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 LMF1Q96S06 567 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 MED28Q9H204 178 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ST6GALNAC4Q9H4F1 302 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 MAGEE1Q9HCI5 957 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 TIGARQ9NQ88 270 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 PPLO60437 1756 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 FAM230AA0A1W2PPH8 454 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 BCAT2O15382 392 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 CREG1O75629 220 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 HERV-K104P61576 105 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 DOC2AQ14183 400 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ALG10Q5BKT4 473 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 PARM1Q6UWI2 310 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 FAM86B1Q8N7N1 296 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 OR52P1PQ8NH57 321 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 MS4A4AQ96JQ5 239 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM168Q9H0V1 697 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 DYNLRB1Q9NP97 96 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ITGB1BP2Q9UKP3 347 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 OAZ3Q9UMX2 235 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ATRNO75882 1429 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 A0A1W2PPW3 197 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 MEIS3P1A6NDR6 274 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ARPC2O15144 300 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 KDM4BO94953 1096 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 RAP2AP10114 183 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 EIF2S3P41091 472 aaKnown RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 HNF4GQ14541 408 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 PTGR1Q14914 329 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 NPY5RQ15761 445 aa7.45□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF551Q7Z340 670 aaPredicted RBP7.45□□□□□ -1.22
SCN9A-201ENST00000303354 LRRC25Q8N386 305 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms