RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 FAM214AQ32MH5 1076 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 C22orf39Q6P5X5 142 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 ZSCAN1Q8NBB4 408 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 DDX1Q92499 740 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 HOXB13Q92826 284 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 RTP4Q96DX8 246 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 BMFQ96LC9 184 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 MGLLQ99685 303 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 NSUN3Q9H649 340 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 INPP5EQ9NRR6 644 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 ERVK-19Q9WJR5 959 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 CACNA1SQ13698 1873 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 LOC730098B7Z3J9 87 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SC5DO75845 299 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 RPS2P15880 293 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 BDKRB1P46663 353 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 NOGQ13253 232 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 BCL2A1Q16548 175 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SYPL2Q5VXT5 272 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 MAP1SQ66K74 1059 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 NRSN1Q8IZ57 195 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 IMP4Q96G21 291 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 RAD9AQ99638 391 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 POLDIP3Q9BY77 421 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SLC7A11Q9UPY5 501 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 PRKAB1Q9Y478 270 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 WDR45Q9Y484 360 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 J3KR12 359 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 EMC8O43402 210 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 TDGQ13569 410 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SLC14A2Q15849 920 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 CELF5Q8N6W0 485 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 WDSUB1Q8N9V3 476 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 ADAMTS19Q8TE59 1207 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 C11orf84Q9BUA3 381 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 ADAM7Q9H2U9 754 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 MVB12BQ9H7P6 319 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 AGPAT4Q9NRZ5 378 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 C14orf119Q9NWQ9 140 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 DLGAP4Q9Y2H0 992 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SHMT2P34897 504 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 NTRK2Q16620 822 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 FOXRED2Q8IWF2 684 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 TRAM1L1Q8N609 369 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 ACBD4Q8NC06 268 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 EIF5A2Q9GZV4 153 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 PPA2Q9H2U2 334 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 FN3KQ9H479 309 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 RRAGCQ9HB90 399 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 PCDHGA8Q9Y5G5 932 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 NOX1Q9Y5S8 564 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 LATS1O95835 1130 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 CHRM5P08912 532 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 JUPP14923 745 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 EDNRBP24530 442 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 CD97P48960 835 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 RTL6Q6ICC9 239 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 OR8K5Q8NH50 307 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 ABCG5Q9H222 651 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 MINDY3Q9H8M7 445 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 CRTAC1Q9NQ79 661 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 DKKL1Q9UK85 242 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SLC35E2BP0CK96 405 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 IFNGR1P15260 489 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 EIF2DP41214 584 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 MRPL49Q13405 166 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 C22orf42Q6IC83 251 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 CEP68Q76N32 757 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 GKN2Q86XP6 184 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 C7orf61Q8IZ16 206 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SYT14Q8NB59 555 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 OR4K17Q8NGC6 315 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 OR4K14Q8NGD5 310 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 SCAMP5Q8TAC9 235 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 DEDD2Q8WXF8 326 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 CNOT9Q92600 299 aaKnown RBP7.33□□□□□ -1.24
SF3B3-201ENST00000302516 KCNA7Q96RP8 456 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 FAM86C1Q9NVL1 165 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 PHIPQ8WWQ0 1821 aa7.33□□□□□ -1.24
SF3B3-201ENST00000302516 OR4Q2P0C623 313 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 GNSP15586 552 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 PCGF2P35227 344 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CRISP1P54107 249 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 RPS15AP62244 130 aaKnown RBP7.32□□□□□ -1.24
SF3B3-201ENST00000302516 PMS2P3Q13401 168 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CDNFQ49AH0 187 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 MAPK15Q8TD08 544 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 FAM46BQ96A09 425 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 SLC28A3Q9HAS3 691 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ZDHHC7Q9NXF8 308 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 GALPQ9UBC7 116 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 DIRAS3O95661 229 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ADRB3P13945 408 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CELP19835 753 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 CD34P28906 385 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 GJA9P57773 515 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 BCL2L15Q5TBC7 163 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 SLC16A9Q7RTY1 509 aa7.32□□□□□ -1.24
SF3B3-201ENST00000302516 ZER1Q7Z7L7 766 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms