RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PDLIM5Q96HC4 596 aaKnown RBP13.4□□□□□ -0.26
SDC2-201ENST00000302190 MED30Q96HR3 178 aa13.4□□□□□ -0.26
SDC2-201ENST00000302190 QRSL1Q9H0R6 528 aaKnown RBP13.4□□□□□ -0.26
SDC2-201ENST00000302190 PAQR5Q9NXK6 330 aaPredicted RBP13.4□□□□□ -0.26
SDC2-201ENST00000302190 TMEM189-UBE2V1I3L0A0 370 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 PITPNM1O00562 1244 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 CPN2P22792 545 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 RPS3P23396 243 aaKnown RBP eCLIP13.4□□□□□ -0.272e-7■■■■□ 21.8
SDC2-201ENST00000302190 SNRPD2P62316 118 aaKnown RBP13.4□□□□□ -0.27
SDC2-201ENST00000302190 ANGPT1Q15389 498 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 C2orf27AQ580R0 203 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 AGAP7PQ5VUJ5 663 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 FAM109BQ6ICB4 259 aaPredicted RBP13.4□□□□□ -0.27
SDC2-201ENST00000302190 CBLL1Q75N03 491 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 ANKRD33Q7Z3H0 272 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 CDK20Q8IZL9 346 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 ASCC1Q8N9N2 400 aaKnown RBP13.4□□□□□ -0.27
SDC2-201ENST00000302190 SMG7Q92540 1137 aaKnown RBP13.4□□□□□ -0.27
SDC2-201ENST00000302190 ARSGQ96EG1 525 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 MAGEB10Q96LZ2 347 aaPredicted RBP13.4□□□□□ -0.27
SDC2-201ENST00000302190 NECTIN4Q96NY8 510 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 SLC6A16Q9GZN6 736 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 C12orf4Q9NQ89 552 aa13.4□□□□□ -0.27
SDC2-201ENST00000302190 RPL36Q9Y3U8 105 aaKnown RBP13.4□□□□□ -0.27
SDC2-201ENST00000302190 C1SP09871 688 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 SMIM11AP58511 58 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 POMZP3Q6PJE2 187 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 SERPINA11Q86U17 422 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 MARCH9Q86YJ5 346 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 GALNT12Q8IXK2 581 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 RHOXF1Q8NHV9 184 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 C16orf78Q8WTQ4 265 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 PPP1R16AQ96I34 528 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 TMEM175Q9BSA9 504 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 SIRT5Q9NXA8 310 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 IFNGR2P38484 337 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 SLC35A2P78381 396 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 ZNF630Q2M218 657 aaPredicted RBP13.39□□□□□ -0.27
SDC2-201ENST00000302190 ARL9Q6T311 187 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 OR4N5Q8IXE1 308 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 PARP16Q8N5Y8 322 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 FIBINQ8TAL6 211 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 CCDC3Q9BQI4 270 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 RACGAP1Q9H0H5 632 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 ZNF780BQ9Y6R6 833 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 PCP4L1A6NKN8 68 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 UPK1AO00322 258 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 NDUFS4O43181 175 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 OR5F1O95221 314 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 PRNPP04156 253 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 SPTBP11277 2137 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 RGS6P49758 472 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 ZNF544Q6NX49 715 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 NATD1Q8N6N6 113 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 CNIH4Q9P003 139 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 OR1A2Q9Y585 309 aa13.39□□□□□ -0.27
SDC2-201ENST00000302190 PRAMEF33A0A0G2JMD5 474 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 WASHC1A8K0Z3 465 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 PRMT3O60678 531 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 PRAMEF10O60809 474 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 UPK1BO75841 260 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 CPNE6O95741 557 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 PRR35P0CG20 571 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 PTX3P26022 381 aaPredicted RBP13.38□□□□□ -0.27
SDC2-201ENST00000302190 PPM1AP35813 382 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 CAMK1Q14012 370 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 BCL7AQ4VC05 210 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 FAM46CQ5VWP2 391 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 GTF2IRD2BQ6EKJ0 949 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 CDC73Q6P1J9 531 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 WASH2PQ6VEQ5 465 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 LUZP2Q86TE4 346 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 GTF2IRD2Q86UP8 949 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 RBM45Q8IUH3 476 aaKnown RBP13.38□□□□□ -0.27
SDC2-201ENST00000302190 GPR151Q8TDV0 419 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 TMEM246Q9BRR3 403 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 SPHK2Q9NRA0 654 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 ERVW-1Q9UQF0 538 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 AGAP5A6NIR3 686 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 CCDC85CA6NKD9 419 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 FAM170BA6NMN3 283 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 H3BNC9 293 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 NUAK1O60285 661 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 IGLV3-27P01718 113 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 MRPL3P09001 348 aaKnown RBP13.38□□□□□ -0.27
SDC2-201ENST00000302190 SLC2A2P11168 524 aaPredicted RBP13.38□□□□□ -0.27
SDC2-201ENST00000302190 RPL4P36578 427 aaKnown RBP13.38□□□□□ -0.27
SDC2-201ENST00000302190 ITGA1P56199 1179 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 GRSF1Q12849 480 aaKnown RBP eCLIP13.38□□□□□ -0.27
SDC2-201ENST00000302190 DUSP7Q16829 419 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 PRSS36Q5K4E3 855 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 OR2G6Q5TZ20 316 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 MZT2BQ6NZ67 158 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 FLCNQ8NFG4 579 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.38□□□□□ -0.27
SDC2-201ENST00000302190 ADAMTS16Q8TE57 1224 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 TMCO6Q96DC7 493 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 ANKRA2Q9H9E1 313 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 CLEC2DQ9UHP7 191 aa13.38□□□□□ -0.27
SDC2-201ENST00000302190 TMEFF2Q9UIK5 374 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms