RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ILKQ13418 452 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 SUZ12Q15022 739 aaKnown RBP10.35□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF284Q2VY69 593 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 BCL2L15Q5TBC7 163 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF57Q68EA5 555 aaPredicted RBP10.35□□□□□ -0.75
ZNF558-201ENST00000301475 TMEM107Q6UX40 140 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 KIAA1324Q6UXG2 1013 aaKnown RBP10.35□□□□□ -0.75
ZNF558-201ENST00000301475 UNC5DQ6UXZ4 953 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 PLEKHM3Q6ZWE6 761 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 LAPTM4BQ86VI4 370 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 OR52N2Q8NGI0 321 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 OR8J1Q8NGP2 316 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 MYO19Q96H55 970 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 FUBP3Q96I24 572 aaKnown RBP eCLIP10.35□□□□□ -0.75
ZNF558-201ENST00000301475 KATNAL1Q9BW62 490 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 ZFYVE1Q9HBF4 777 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 KCTD5Q9NXV2 234 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 NOD1Q9Y239 953 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 FCF1Q9Y324 198 aaKnown RBP10.35□□□□□ -0.75
ZNF558-201ENST00000301475 MAP4K5Q9Y4K4 846 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 PLXNB3Q9ULL4 1909 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 GLYATL1P3A0A0U1RQE8 302 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 ATP6V1G2-DDX39BF2Z307 99 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 CASKO14936 926 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 LANCL1O43813 399 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 BDKRB1P46663 353 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 XKP51811 444 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 PFN3P60673 137 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 B4GALNT1Q00973 533 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 SEMG2Q02383 582 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 IRF8Q02556 426 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 GPR176Q14439 515 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 INSL4Q14641 139 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 HEPACAMQ14CZ8 416 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 SPDYE7PQ495Y7 208 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 CRB2Q5IJ48 1285 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 RNF219Q5W0B1 726 aaPredicted RBP10.35□□□□□ -0.75
ZNF558-201ENST00000301475 GPR139Q6DWJ6 353 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 BRAT1Q6PJG6 821 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 CASP12Q6UXS9 341 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 CAMKMTQ7Z624 323 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 NXPE1Q8N323 547 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 VPS37AQ8NEZ2 397 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 OR6C4Q8NGE1 309 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 GTF3C2Q8WUA4 911 aaPredicted RBP10.35□□□□□ -0.75
ZNF558-201ENST00000301475 SLC12A9Q9BXP2 914 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 LIN7BQ9HAP6 207 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 RABL2AQ9UBK7 228 aaPredicted RBP10.35□□□□□ -0.75
ZNF558-201ENST00000301475 CKAP5Q14008 2032 aa10.35□□□□□ -0.75
ZNF558-201ENST00000301475 M0QZ92 97 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 TLX2O43763 284 aaPredicted RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 MPC2O95563 127 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 RAB36O95755 333 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 TP53P04637 393 aaPredicted RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 IFNW1P05000 195 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 PCSK2P16519 638 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 SLC6A1P30531 599 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 CD52P31358 61 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 SOX18P35713 384 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 GSTM5P46439 218 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 GAS1P54826 345 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 WNT4P56705 351 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 CRHR2Q13324 411 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 EXOSC2Q13868 293 aaKnown RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 ELOAQ14241 798 aaKnown RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 FGFBP1Q14512 234 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 SNAPC1Q16533 368 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 SLC5A12Q1EHB4 618 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 SYT14P1Q58G82 188 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 CDKL4Q5MAI5 379 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 ARMC12Q5T9G4 340 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 ANXA8L1Q5VT79 327 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF655Q8N720 491 aaPredicted RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 APOBEC4Q8WW27 367 aaKnown RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 GATAD2BQ8WXI9 593 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 CIDECQ96AQ7 238 aaPredicted RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 TM6SF2Q9BZW4 377 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 KCNN2Q9H2S1 579 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 LINC00597Q9H2U6 94 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 TMEM38AQ9H6F2 299 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 RC3H2Q9HBD1 1191 aaKnown RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 TVP23BQ9NYZ1 205 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 TESQ9UGI8 421 aaKnown RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 FBXO9Q9UK97 447 aaPredicted RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 NCKAP1Q9Y2A7 1128 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 E7EQ34 232 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 STK25O00506 426 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 RNASET2O00584 256 aaKnown RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 SLC9A3R1O14745 358 aaPredicted RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 TSPAN4O14817 238 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 OR10H3O60404 316 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 TFPIP10646 304 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 CXCL3P19876 107 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 ELAVL4P26378 380 aaKnown RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 GKP32189 559 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 INPP1P49441 399 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 RIN1Q13671 783 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 GALEQ14376 348 aa10.34□□□□□ -0.75
ZNF558-201ENST00000301475 CXorf57Q6NSI4 855 aaKnown RBP10.34□□□□□ -0.75
ZNF558-201ENST00000301475 FAM122CQ6P4D5 195 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms