RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 BCL2L14Q9BZR8 327 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 TXNRD2Q9NNW7 524 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 CFAP97Q9P2B7 532 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 OR6C74A6NCV1 312 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 CNMDO75829 334 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 SPDEFO95238 335 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 IFNA14P01570 189 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 URODP06132 367 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 UCHL1P09936 223 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 GABRB1P18505 474 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 SDC1P18827 310 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 CSNK2BP67870 215 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 SERTAD2Q14140 314 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 CST9Q5W186 159 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 ADNP2Q6IQ32 1131 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 FAM198BQ6UWH4 519 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 DEF8Q6ZN54 512 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 OLIG3Q7RTU3 272 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 SYT9Q86SS6 491 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 ZNF687Q8N1G0 1237 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 SAMD12Q8N8I0 201 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 KLHL6Q8WZ60 621 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 FAM167AQ96KS9 214 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 THAP7Q9BT49 309 aaPredicted RBP13.74□□□□□ -0.21
CDT1-201ENST00000301019 KCNH6Q9H252 994 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 ACTR10Q9NZ32 417 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
CDT1-201ENST00000301019 CASTOR2A6NHX0 329 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 WNT9AO14904 365 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 ARPC5O15511 151 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 GADD45GO95257 159 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 KCNJ3P48549 501 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 UBE2MP61081 183 aaKnown RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 GINS1Q14691 196 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 OPCMLQ14982 345 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 ST3GAL2Q16842 350 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 SLC5A12Q1EHB4 618 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 HSD17B12Q53GQ0 312 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 CTSL3PQ5NE16 218 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 FAAP20Q6NZ36 180 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 CBLL1Q75N03 491 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 PRSS45Q7RTY3 260 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 TRIM69Q86WT6 500 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 UFD1Q92890 307 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 PTP4A1Q93096 173 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 CMSS1Q9BQ75 279 aaKnown RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 CIPCQ9C0C6 399 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 ARHGAP39Q9C0H5 1083 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 SHARPINQ9H0F6 387 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 NFKBIL1Q9UBC1 381 aaPredicted RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 ZFR2Q9UPR6 939 aaKnown RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 PRELID3BQ9Y3B1 194 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 IQCMA0A1B0GVH7 501 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 PRR23D1E9PI22 279 aaPredicted RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 F8W036 122 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 PRR23D2P0DMB1 279 aaPredicted RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 DARSP14868 501 aaKnown RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 ACADLP28330 430 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 BDKRB1P46663 353 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 MVDP53602 400 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 RPS26P62854 115 aaKnown RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 NCF4Q15080 339 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 COL28A1Q2UY09 1125 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 CLEC12AQ5QGZ9 265 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 PTRHD1Q6GMV3 140 aaKnown RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 TECPR1Q7Z6L1 1165 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 OR6K2Q8NGY2 324 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 NFKBIDQ8NI38 313 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 LRRC46Q96FV0 321 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 P2RY13Q9BPV8 354 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 ATG10Q9H0Y0 220 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 PPP1R3EQ9H7J1 279 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 MRTO4Q9UKD2 239 aaKnown RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 OR10H1Q9Y4A9 318 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 HS3ST4Q9Y661 456 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 ANXA2P2A6NMY6 339 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 MID1O15344 667 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 F12P00748 615 aaPredicted RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 OR4Q2P0C623 313 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 CTPS1P17812 591 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 PTPN6P29350 595 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 LCN1P31025 176 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 ZNF791Q3KP31 576 aaPredicted RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 ZCCHC12Q6PEW1 402 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 CASP12Q6UXS9 341 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 ZNF730Q6ZMV8 503 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 GPR135Q8IZ08 494 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 WDR48Q8TAF3 677 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 TSGA13Q96PP4 275 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 RAD9AQ99638 391 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 IER2Q9BTL4 223 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 GABARAPL3Q9BY60 117 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 TTTY10Q9BZA0 68 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 GPR63Q9BZJ6 419 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 NMNAT1Q9HAN9 279 aaPredicted RBP13.73□□□□□ -0.21
CDT1-201ENST00000301019 TMEM5Q9Y2B1 443 aa13.73□□□□□ -0.21
CDT1-201ENST00000301019 TRBV5-3A0A0A0MS03 114 aa13.72□□□□□ -0.21
CDT1-201ENST00000301019 CCL15-CCL14A0A0B4J2E2 113 aa13.72□□□□□ -0.21
CDT1-201ENST00000301019 TRBV4-1A0A0J9YWV2 114 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms