RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 SRRM1Q8IYB3 904 aaKnown RBP12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 SLC15A4Q8N697 577 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 PTGR2Q8N8N7 351 aaPredicted RBP12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 SREK1Q8WXA9 508 aaKnown RBP12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 ZNF592Q92610 1267 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 PPWD1Q96BP3 646 aaKnown RBP12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 PHF21BQ96EK2 531 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 PAFAH2Q99487 392 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 SERPINI1Q99574 410 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 FAM173AQ9BQD7 235 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 NTMT1Q9BV86 223 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 ZNF717Q9BY31 904 aaPredicted RBP12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 DEFB127Q9H1M4 99 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 SACM1LQ9NTJ5 587 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 ZNF358Q9NW07 568 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 COQ3Q9NZJ6 369 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 ASB4Q9Y574 426 aa12.85□□□□□ -0.35
TMEM41B-201ENST00000299596 CSMD1Q96PZ7 3565 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 A0A0A6YYD5 115 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 IQANK1A0A1B0GTG1 560 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 OR7A17O14581 309 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 OR10H2O60403 315 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 SMIM24O75264 130 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 EEDO75530 441 aaKnown RBP12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 PDE9AO76083 593 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 SEMA3DO95025 777 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 P04436 131 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 CTAGE8P0CG41 777 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 GALNSP34059 522 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 ARL1P40616 181 aaPredicted RBP12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 TBL3Q12788 808 aaKnown RBP12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 ASPHQ12797 758 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 UBAP2Q5T6F2 1119 aaKnown RBP12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 C3P1Q6ZMU1 363 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 FAM47EQ6ZV65 393 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 CD163Q86VB7 1156 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 NUDT13Q86X67 352 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 CTAGE4Q8IX94 777 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 NOA1Q8NC60 698 aaKnown RBP12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 SLC22A8Q8TCC7 542 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 RIT1Q92963 219 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 TTTY12Q9BZ98 90 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 TP63Q9H3D4 680 aaPredicted RBP12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 ZDHHC11Q9H8X9 412 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 IL1RL2Q9HB29 575 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 AHSPQ9NZD4 102 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 ZNF180Q9UJW8 692 aa12.84□□□□□ -0.35
TMEM41B-201ENST00000299596 A0A1W2PR48 441 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 PINLYPA6NC86 204 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 POC1B-GALNT4F8VUJ3 575 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 TMPRSS11DO60235 418 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 ZNF354AO60765 605 aaPredicted RBP12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 GLSO94925 669 aaPredicted RBP12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 NR2F6P10588 404 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 SPRED3Q2MJR0 410 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 FRG2Q64ET8 278 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 TTC19Q6DKK2 380 aaPredicted RBP12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 DGAT2L6Q6ZPD8 337 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 SLC29A4Q7RTT9 530 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 GDF7Q7Z4P5 450 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 C9orf40Q8IXQ3 194 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 DND1Q8IYX4 353 aaKnown RBP12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 OR52B6Q8NGF0 335 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 CA5BP1Q8WTZ4 195 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 CDK15Q96Q40 435 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 FRG2BQ96QU4 278 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 MRPL57Q9BQC6 102 aaKnown RBP12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 XPR1Q9UBH6 696 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 PCTPQ9UKL6 214 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 APCP25054 2843 aa12.83□□□□□ -0.36
TMEM41B-201ENST00000299596 A0A087WUV0 522 aaPredicted RBP12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 OR14I1A6ND48 311 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 GLOD5A6NK44 160 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 OR6C76A6NM76 312 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 FAM166BA8MTA8 275 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 G3V3Y1 287 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 HRKO00198 91 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 PRKRAO75569 313 aaKnown RBP12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 SLC35E2P0CK97 266 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 ECHS1P30084 290 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 HERVK_113P63132 956 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 ERVK-8P63133 956 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 IFT88Q13099 833 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 ZNF267Q14586 743 aaPredicted RBP12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 CDSNQ15517 529 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 HYAL4Q2M3T9 481 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 ZNF791Q3KP31 576 aaPredicted RBP12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 LGSNQ5TDP6 509 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 SLC22A10Q63ZE4 541 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 RNF111Q6ZNA4 994 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 NCCRP1Q6ZVX7 275 aaPredicted RBP12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 PAGE2Q7Z2X7 111 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 MILR1Q7Z6M3 343 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 FAM109AQ8N4B1 249 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 ASB5Q8WWX0 329 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 SDCCAG3Q96C92 435 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 CNPPD1Q9BV87 410 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 ERVK-6Q9BXR3 956 aa12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 MRPL46Q9H2W6 279 aaKnown RBP12.82□□□□□ -0.36
TMEM41B-201ENST00000299596 ZBTB26Q9HCK0 441 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms