RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 LRFN5Q96NI6 719 aa16.74■□□□□ 0.27
CCDC78-201ENST00000293889 VCX3BQ9H321 246 aa16.74■□□□□ 0.27
CCDC78-201ENST00000293889 AKIRIN1Q9H9L7 192 aaPredicted RBP16.74■□□□□ 0.27
CCDC78-201ENST00000293889 POLR1BQ9H9Y6 1135 aa16.74■□□□□ 0.27
CCDC78-201ENST00000293889 EHD3Q9NZN3 535 aa16.74■□□□□ 0.27
CCDC78-201ENST00000293889 FOXJ2Q9P0K8 574 aa16.74■□□□□ 0.27
CCDC78-201ENST00000293889 FREM2Q5SZK8 3169 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 TEX51A0A1B0GUA7 166 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 JRKO75564 520 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 PGRP06401 933 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 FHP07954 510 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 S100A3P33764 101 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 KIR3DL1P43629 444 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 RTP5Q14D33 572 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 MAPRE2Q15555 327 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 MPEG1Q2M385 716 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 DPY19L1Q2PZI1 675 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 OR4F3Q6IEY1 312 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 FAM180BQ6P0A1 224 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 GALNT6Q8NCL4 622 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 OR8J2Q8NGG1 315 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 DNAJB14Q8TBM8 379 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 EXOSC8Q96B26 276 aaKnown RBP16.73■□□□□ 0.27
CCDC78-201ENST00000293889 ZNF764Q96H86 408 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-201ENST00000293889 SLC25A23Q9BV35 468 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 DUSP26Q9BV47 211 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 TMEM121BQ9BXQ6 578 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-201ENST00000293889 SPRY4Q9C004 299 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 PRDM9Q9NQV7 894 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 TAS2R7Q9NYW3 318 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 CTSFQ9UBX1 484 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 UTS2RQ9UKP6 389 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 POMPQ9Y244 141 aa16.73■□□□□ 0.27
CCDC78-201ENST00000293889 ASPDHA6ND91 283 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 CCDC154A6NI56 674 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 B4GALT2O60909 372 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 KLK3P07288 261 aaPredicted RBP16.72■□□□□ 0.27
CCDC78-201ENST00000293889 WNT3P56703 355 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 TLR1Q15399 786 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 ZC3H7AQ8IWR0 971 aaKnown RBP16.72■□□□□ 0.27
CCDC78-201ENST00000293889 TSPEARQ8WU66 669 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 TANKQ92844 425 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 CIDECQ96AQ7 238 aaPredicted RBP16.72■□□□□ 0.27
CCDC78-201ENST00000293889 OR52E6Q96RD3 313 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 BHLHE41Q9C0J9 482 aaPredicted RBP16.72■□□□□ 0.27
CCDC78-201ENST00000293889 MKKSQ9NPJ1 570 aaPredicted RBP16.72■□□□□ 0.27
CCDC78-201ENST00000293889 LANCL2Q9NS86 450 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 ATAD3AQ9NVI7 634 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 SCN2AQ99250 2005 aa16.72■□□□□ 0.27
CCDC78-201ENST00000293889 A0A1W2PP18 115 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 FBP2O00757 339 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 CFLARO15519 480 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 CDC123O75794 336 aaPredicted RBP16.71■□□□□ 0.27
CCDC78-201ENST00000293889 BMP10O95393 424 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 DLGAP3O95886 979 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 EFNA1P20827 205 aaPredicted RBP16.71■□□□□ 0.27
CCDC78-201ENST00000293889 AGXTP21549 392 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 CLCN2P51788 898 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 VWA2Q5GFL6 755 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 IZUMO2Q6UXV1 221 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 RNF111Q6ZNA4 994 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 OVCH1Q7RTY7 1134 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 OR4N5Q8IXE1 308 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 ZNF595Q8IYB9 648 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 DEFB107AQ8IZN7 70 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 MR1Q95460 341 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 SLC46A1Q96NT5 459 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 OR1F2PQ96R84 312 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 DPH2Q9BQC3 489 aaPredicted RBP16.71■□□□□ 0.27
CCDC78-201ENST00000293889 B3GNT4Q9C0J1 378 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 SLC35C2Q9NQQ7 365 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 IFT80Q9P2H3 777 aaPredicted RBP16.71■□□□□ 0.27
CCDC78-201ENST00000293889 ZNF282Q9UDV7 671 aaPredicted RBP16.71■□□□□ 0.27
CCDC78-201ENST00000293889 PSME2Q9UL46 239 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 MRPS33Q9Y291 106 aaKnown RBP16.71■□□□□ 0.27
CCDC78-201ENST00000293889 CROCCQ5TZA2 2017 aa16.71■□□□□ 0.27
CCDC78-201ENST00000293889 CHD8Q9HCK8 2581 aa16.71■□□□□ 0.26
CCDC78-201ENST00000293889 IGLV3-12A0A075B6K2 115 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 A0A1W2PS29 197 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 DYTNA2CJ06 578 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 OR2W5A6NFC9 320 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 BRINP1O60477 761 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 SCN2BO60939 215 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 LDB3O75112 727 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 ERAL1O75616 437 aaKnown RBP16.7■□□□□ 0.26
CCDC78-201ENST00000293889 IL10P22301 178 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 STX5Q13190 355 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 ZNF750Q32MQ0 723 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 FAM199XQ6PEV8 388 aaPredicted RBP16.7■□□□□ 0.26
CCDC78-201ENST00000293889 C16orf89Q6UX73 402 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 C6orf15Q6UXA7 325 aaPredicted RBP16.7■□□□□ 0.26
CCDC78-201ENST00000293889 ZNF517Q6ZMY9 492 aaPredicted RBP16.7■□□□□ 0.26
CCDC78-201ENST00000293889 MED25Q71SY5 747 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 TIPARPQ7Z3E1 657 aaKnown RBP16.7■□□□□ 0.26
CCDC78-201ENST00000293889 OR4K14Q8NGD5 310 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 ANKRD9Q96BM1 317 aaPredicted RBP16.7■□□□□ 0.26
CCDC78-201ENST00000293889 NXPE2Q96DL1 559 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 FAM192AQ9GZU8 254 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 CHST8Q9H2A9 424 aa16.7■□□□□ 0.26
CCDC78-201ENST00000293889 ASCL3Q9NQ33 180 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms