RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZNF670-ZNF695F2Z2N8 137 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PROM1O43490 865 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 HSD17B1P14061 328 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 HOXB2P14652 356 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PVALBP20472 110 aaPredicted RBP11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 RPP38P78345 283 aaKnown RBP11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 E2F1Q01094 437 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 CLCA4Q14CN2 919 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 RHEBQ15382 184 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 TRAM1Q15629 374 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 UGT8Q16880 541 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 SCGB2B2Q4G0G5 96 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PRAMEF14Q5SWL7 426 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PRAMEF13Q5VWM6 474 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 LCN8Q6JVE9 175 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 FBXL22Q6P050 247 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 RGL4Q8IZJ4 473 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PNLDC1Q8NA58 520 aaKnown RBP11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 RHEBL1Q8TAI7 183 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 GATA6Q92908 595 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PEX13Q92968 403 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 KCNA7Q96RP8 456 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF304Q9HCX3 659 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 RABL2AQ9UBK7 228 aaPredicted RBP11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 RABL2BQ9UNT1 228 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 TMEM5Q9Y2B1 443 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 C2orf92A0A1B0GVN3 265 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 WNT9AO14904 365 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF20P17024 532 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 SOX9P48436 509 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PRKCDQ05655 676 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 ILF3Q12906 894 aaKnown RBP eCLIP11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 GXYLT1Q4G148 440 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 TECRLQ5HYJ1 363 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 SNAP47Q5SQN1 464 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 BMP8AQ7Z5Y6 402 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 TMED4Q7Z7H5 227 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 AMZ2Q86W34 360 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZSWIM9Q86XI8 627 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 Q8N402 240 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF366Q8N895 744 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 PSD4Q8NDX1 1056 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 HYLS1Q96M11 299 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 ANKRD60Q9BZ19 345 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLC39A1Q9NY26 324 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 GIMAP2Q9UG22 337 aa11.34□□□□□ -0.59
SYNGAP1-201ENST00000293748 TRAV6A0A075B6T7 132 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 A0A1B0GVC2 190 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 CACNG3O60359 315 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SOX14O95416 240 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 KLF8O95600 359 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 EPHX1P07099 455 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 NTSR1P30989 418 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 MAP2K4P45985 399 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 DGKEP52429 567 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SERINC3Q13530 473 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 BAIAP2L2Q6UXY1 529 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 DENND6BQ8NEG7 585 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR8J1Q8NGP2 316 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR10Q1Q8NGQ4 319 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 NEIL3Q8TAT5 605 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF471Q9BX82 626 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF350Q9GZX5 532 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF700Q9H0M5 742 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ELOVL2Q9NXB9 296 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SAP18O00422 153 aaKnown RBP11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 LAPTM4AQ15012 233 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 TRAM2Q15035 370 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 PTCHD3Q3KNS1 767 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF783Q6ZMS7 281 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 LRRC69Q6ZNQ3 347 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SPEM1Q8N4L4 309 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SAMD12Q8N8I0 201 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZCCHC10Q8TBK6 192 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SOX17Q9H6I2 414 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 AIG1Q9NVV5 245 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 C14orf119Q9NWQ9 140 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 FAM118AQ9NWS6 357 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 TAS2R3Q9NYW6 316 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 HEBP2Q9Y5Z4 205 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 CLCA3PQ9Y6N3 262 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 C12orf71A8MTZ7 269 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC1A7O00341 560 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SNNO75324 88 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 CSN2P05814 226 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 IL3P08700 152 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 DCKP27707 260 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 HTR2AP28223 471 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 KDELR2P33947 212 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 SP140Q13342 867 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 PPP1R3AQ16821 1122 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 TCEAL6Q6IPX3 200 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 LYSMD3Q7Z3D4 306 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 GID4Q8IVV7 300 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ATP6V1C2Q8NEY4 427 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ABHD11Q8NFV4 315 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR56A1Q8NGH5 318 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 RHBDF1Q96CC6 855 aa11.33□□□□□ -0.6
SYNGAP1-201ENST00000293748 ADAD1Q96M93 576 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms