RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 BCAS2O75934 225 aaPredicted RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 APOL3O95236 402 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 PGCP20142 388 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 PVALBP20472 110 aaPredicted RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 EXOC3L2Q2M3D2 409 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 IER5LQ5T953 404 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 OR52E8Q6IFG1 317 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 MRPL10Q7Z7H8 261 aaKnown RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 SRA1Q9HD15 236 aaKnown RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 PTTG2Q9NZH5 202 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 CHD2O14647 1828 aaKnown RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 GRPRP30550 384 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 GAS6Q14393 721 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 TMEM35AQ53FP2 167 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 TRIM73Q86UV7 250 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 C15orf40Q8WUR7 153 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 ASB15Q8WXK1 588 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 DPAGT1Q9H3H5 408 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 NOP16Q9Y3C1 178 aaKnown RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 SEMA3DO95025 777 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 HSD3B1P14060 373 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 HSD3B2P26439 372 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 SIM1P81133 766 aaPredicted RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 CRYZQ08257 329 aaKnown RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 ATG9BQ674R7 924 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 KLHDC10Q6PID8 442 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 UBE2Q1Q7Z7E8 422 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 YTHDF1Q9BYJ9 559 aaKnown RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 FBRSQ9HAH7 460 aa16.54■□□□□ 0.24
SHANK1-201ENST00000293441 NKX1-2Q9UD57 310 aaPredicted RBP16.54■□□□□ 0.24
SHANK1-201ENST00000293441 J3QRK9 145 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 XPNPEP2O43895 674 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 VNN2O95498 520 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 SUOXP51687 545 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 KCTD9Q7L273 389 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 OR2T33Q8NG76 320 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 ACSL6Q9UKU0 697 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 KCNS2Q9ULS6 477 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 ALDOAP04075 364 aaKnown RBP16.53■□□□□ 0.24
SHANK1-201ENST00000293441 SLC35E2BP0CK96 405 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 F8A1P23610 371 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 ADAM17P78536 824 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 MVKQ03426 396 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 NADK2Q4G0N4 442 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 CES4AQ5XG92 561 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 KLHDC8AQ8IYD2 350 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 OR8J3Q8NGG0 315 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 RHBDD1Q8TEB9 315 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 DPH2Q9BQC3 489 aaPredicted RBP16.53■□□□□ 0.24
SHANK1-201ENST00000293441 DOHHQ9BU89 302 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 SLC7A11Q9UPY5 501 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 IGKV6D-21A0A0A0MT36 114 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 IGKV6-21A0A0C4DH24 114 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 DRD1P21728 446 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 GRM7Q14831 915 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 DEFB133Q30KQ1 61 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 SPATS1Q496A3 300 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 SLC44A3Q8N4M1 653 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 DNAAF1Q8NEP3 725 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 ABCD2Q9UBJ2 740 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 PRKCAP17252 672 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 WDR5P61964 334 aaKnown RBP16.53■□□□□ 0.24
SHANK1-201ENST00000293441 DLX2Q07687 328 aaPredicted RBP16.53■□□□□ 0.24
SHANK1-201ENST00000293441 SCAPQ12770 1279 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 SLC25A25Q6KCM7 469 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 SHQ1Q6PI26 577 aaKnown RBP16.53■□□□□ 0.24
SHANK1-201ENST00000293441 CDCA3Q99618 268 aaPredicted RBP16.53■□□□□ 0.24
SHANK1-201ENST00000293441 PIP5K1AQ99755 562 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 MYH3P11055 1940 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 M0QZQ0 153 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 C1orf220Q5T0J3 134 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 OR2L2Q8NH16 312 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 ZUFSPQ96AP4 578 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 WACQ9BTA9 647 aa16.53■□□□□ 0.24
SHANK1-201ENST00000293441 SCAMP2O15127 329 aaKnown RBP16.52■□□□□ 0.24
SHANK1-201ENST00000293441 FDXRP22570 491 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 GTF2IRD2BQ6EKJ0 949 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 GTF2IRD2Q86UP8 949 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 AIFM2Q9BRQ8 373 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 LIPT1Q9Y234 373 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 PCDHGA10Q9Y5H3 936 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 KLHL33A6NCF5 533 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 A6NLC8 198 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 VSTM2BA6NLU5 285 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 PLATP00750 562 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 GALK2Q01415 458 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 ZBED5Q49AG3 693 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 FAM180BQ6P0A1 224 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 GALNT11Q8NCW6 608 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 RADILQ96JH8 1075 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 SLC33A1O00400 549 aaPredicted RBP16.52■□□□□ 0.24
SHANK1-201ENST00000293441 FAAHO00519 579 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 PROS1P07225 676 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 ADH7P40394 386 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 GSTM4Q03013 218 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 ANKDD1AQ495B1 522 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 TMEM151BQ8IW70 566 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 ZNF778Q96MU6 729 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 PCDHGA6Q9Y5G7 932 aa16.52■□□□□ 0.24
SHANK1-201ENST00000293441 A0A1W2PPK0 400 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms