RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 SWI5Q1ZZU3 235 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 LRIF1Q5T3J3 769 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 ZSWIM9Q86XI8 627 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 MFSD2AQ8NA29 543 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 DNAJA4Q8WW22 397 aaPredicted RBP17.71■□□□□ 0.42
PCDH1-201ENST00000287008 MEAF6Q9HAF1 191 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 ACTR10Q9NZ32 417 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 GNG8Q9UK08 70 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 SRPK3Q9UPE1 567 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 VSTM2BA6NLU5 285 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 TIMP2P16035 220 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 DSG2Q14126 1118 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 SLC27A4Q6P1M0 643 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 LARP4Q71RC2 724 aaKnown RBP eCLIP17.7■□□□□ 0.42
PCDH1-201ENST00000287008 ZNF283Q8N7M2 679 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 OR2B6P58173 313 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 TDGQ13569 410 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 AKIRIN2Q53H80 203 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 PIANPQ8IYJ0 282 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 OR7G3Q8NG95 312 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 FANK1Q8TC84 345 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 HS6ST2Q96MM7 605 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 ERMAPQ96PL5 475 aaPredicted RBP17.7■□□□□ 0.42
PCDH1-201ENST00000287008 MED28Q9H204 178 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 DNAJC27Q9NZQ0 273 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 LINC01553A4QN01 128 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 ACOX3O15254 700 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 IVDP26440 423 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 NDUFAF5Q5TEU4 345 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 GRHL2Q6ISB3 625 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 PDZD3Q86UT5 571 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 ARMC10Q8N2F6 343 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 SPPL3Q8TCT6 385 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 CD200R1Q8TD46 325 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 MND1Q9BWT6 205 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 R3HDMLQ9H3Y0 253 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 TIMMDC1Q9NPL8 285 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 A0A1W2PPL8 197 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 CSNK1DP48730 415 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 ZNF33BQ06732 778 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 PTGDR2Q9Y5Y4 395 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 NUMBLQ9Y6R0 609 aa17.7■□□□□ 0.42
PCDH1-201ENST00000287008 MYH10P35580 1976 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 TMX2-CTNND1H3BSU7 103 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 RFXAPO00287 272 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 CAPZA1P52907 286 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 CBLBQ13191 982 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 MPP2Q14168 576 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 SGCAQ16586 387 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 ABCA11PQ4W5N1 156 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 PLEKHG7Q6ZR37 379 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 UTS2BQ765I0 119 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 ZNF551Q7Z340 670 aaPredicted RBP17.69■□□□□ 0.42
PCDH1-201ENST00000287008 OR6C4Q8NGE1 309 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 GPR150Q8NGU9 434 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 NXPE3Q969Y0 559 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 FAM129BQ96TA1 746 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 POLE3Q9NRF9 147 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 ENTPD6O75354 484 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 MT-ND5P03915 603 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 EMP2P54851 167 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 TAS2R43P59537 309 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 RPS26P62854 115 aaKnown RBP17.69■□□□□ 0.42
PCDH1-201ENST00000287008 ADAM17P78536 824 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 TANGO2Q6ICL3 276 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 DUS1LQ6P1R4 473 aaKnown RBP17.69■□□□□ 0.42
PCDH1-201ENST00000287008 PNCKQ6P2M8 343 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 C15orf40Q8WUR7 153 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 ASB15Q8WXK1 588 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 MOCOSQ96EN8 888 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 EHD1Q9H4M9 534 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 GLS2Q9UI32 602 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 RGPD5Q99666 1765 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 C2orf92A0A1B0GVN3 265 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 ZNF878C9JN71 531 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 FAM189A1O60320 539 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 MTRF1O75570 445 aaKnown RBP17.69■□□□□ 0.42
PCDH1-201ENST00000287008 AK4P27144 223 aaPredicted RBP17.69■□□□□ 0.42
PCDH1-201ENST00000287008 MAPK3P27361 379 aaPredicted RBP17.69■□□□□ 0.42
PCDH1-201ENST00000287008 ECHS1P30084 290 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 MEDAGQ5VYS4 303 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 RPL13AP3Q6NVV1 102 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 TMEM151BQ8IW70 566 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 VN1R2Q8NFZ6 395 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 BMFQ96LC9 184 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 NAA11Q9BSU3 229 aaPredicted RBP17.69■□□□□ 0.42
PCDH1-201ENST00000287008 UBAP1Q9NZ09 502 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 OR6C2Q9NZP2 312 aa17.69■□□□□ 0.42
PCDH1-201ENST00000287008 A0A0U1RQS6 177 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 FAAHO00519 579 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 ZNF100Q8IYN0 542 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 HORMAD2Q8N7B1 307 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 TOR1AIP2Q8NFQ8 470 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 PMM1Q92871 262 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 TTYH1Q9H313 450 aaPredicted RBP17.68■□□□□ 0.42
PCDH1-201ENST00000287008 SLC22A1O15245 554 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 HTR1EP28566 365 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 HTR6P50406 440 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 SH3BP2P78314 561 aa17.68■□□□□ 0.42
PCDH1-201ENST00000287008 ODF4Q2M2E3 257 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms