RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PTGES3Q15185 160 aaKnown RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 ZNF385BQ569K4 471 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 SLC25A30Q5SVS4 291 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 SAXO2Q658L1 398 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 FAM71E1Q6IPT2 247 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 MED27Q6P2C8 311 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 PLET1Q6UQ28 207 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 RNF175Q8N4F7 328 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 FAM46DQ8NEK8 389 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 HUS1BQ8NHY5 278 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 MAL2Q969L2 176 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 KIAA1143Q96AT1 154 aaPredicted RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 MTERF1Q99551 399 aaKnown RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 ZSCAN5AQ9BUG6 496 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 ATG10Q9H0Y0 220 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 HHATLQ9HCP6 504 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 MAT2BQ9NZL9 334 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 ANGPT4Q9Y264 503 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 ITM2BQ9Y287 266 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 INSL5Q9Y5Q6 135 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 FABP12A6NFH5 140 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 H3BM21 787 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 PSKH1P11801 424 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 MYOGP15173 224 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 IMPA1P29218 277 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 PRLHRP49683 370 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 CRISP1P54107 249 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 HBA1P69905 142 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 CDK6Q00534 326 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 TATDN3Q17R31 274 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 TOR2AQ5JU69 321 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 COX20Q5RI15 118 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 SPOUT1Q5T280 376 aaKnown RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 HENMT1Q5T8I9 393 aaKnown RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 SERPINA13PQ6UXR4 307 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 RFLNAQ6ZTI6 216 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 ESX1Q8N693 406 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 ARL14EPQ8N8R7 260 aaPredicted RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 SLC35A5Q9BS91 424 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 EFCAB11Q9BUY7 163 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 RC3H2Q9HBD1 1191 aaKnown RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 CCDC85CA6NKD9 419 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 MEN1O00255 615 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 AKR7A2O43488 359 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 PROM1O43490 865 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 RECKO95980 971 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 CXCL10P02778 98 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 ETFAP13804 333 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 CSTF2P33240 577 aaKnown RBP eCLIP9.87□□□□□ -0.83
SKA1-201ENST00000285116 NCF4Q15080 339 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 LCN1P1Q5VSP4 162 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 C12orf73Q69YU5 71 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 FRMPD2BQ6IN97 320 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 KLHL17Q6TDP4 642 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 PAMR1Q6UXH9 720 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.87□□□□□ -0.83
SKA1-201ENST00000285116 BBS7Q8IWZ6 715 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 VANGL1Q8TAA9 524 aaPredicted RBP9.87□□□□□ -0.83
SKA1-201ENST00000285116 SKA2Q8WVK7 121 aaPredicted RBP9.87□□□□□ -0.83
SKA1-201ENST00000285116 ZNF764Q96H86 408 aaPredicted RBP9.87□□□□□ -0.83
SKA1-201ENST00000285116 FAM129BQ96TA1 746 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 SGPP1Q9BX95 441 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 SYNDIG1Q9H7V2 258 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 A4GALTQ9NPC4 353 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 STUB1Q9UNE7 303 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 DOCK6Q96HP0 2047 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 GRM6O15303 877 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 PLA2G10O15496 165 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 IFI30P13284 250 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 SEMG2Q02383 582 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 ILKQ13418 452 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 LAMTOR1Q6IAA8 161 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 FBXL6Q8N531 539 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 CAMKK1Q8N5S9 505 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 ZNF557Q8N988 423 aaPredicted RBP9.87□□□□□ -0.83
SKA1-201ENST00000285116 NFKBIDQ8NI38 313 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 PXYLP1Q8TE99 480 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 ZC3HAV1LQ96H79 300 aaKnown RBP9.87□□□□□ -0.83
SKA1-201ENST00000285116 MSLNLQ96KJ4 702 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 MCOLN1Q9GZU1 580 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 ABCB9Q9NP78 766 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 DMRT3Q9NQL9 472 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 EIF3KQ9UBQ5 218 aaKnown RBP9.87□□□□□ -0.83
SKA1-201ENST00000285116 CLEC4EQ9ULY5 219 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 HSPB11Q9Y547 144 aa9.87□□□□□ -0.83
SKA1-201ENST00000285116 HYKKA2RU49 373 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 KLHL18O94889 574 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 GADD45GO95257 159 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 CYP17A1P05093 508 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 ADRA2AP08913 450 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 TSPAN19P0C672 248 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 CTRB1P17538 263 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 CRATP43155 626 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 CRYBB2P43320 205 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 MAPK12P53778 367 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 RAB25P57735 213 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 SNRPD2P62316 118 aaKnown RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 HOXC5Q00444 222 aa9.86□□□□□ -0.83
SKA1-201ENST00000285116 ALDH6A1Q02252 535 aaKnown RBP9.86□□□□□ -0.83
SKA1-201ENST00000285116 NAE1Q13564 534 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms