RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SPATA7Q9P0W8 599 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 FAM8A1Q9UBU6 413 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 NDOR1Q9UHB4 597 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF451Q9Y4E5 1061 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 OXSR1O95747 527 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-201ENST00000277198 ADAP00813 363 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 PTHP01270 115 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 CTSLP07711 333 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 TDGF1P13385 188 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 CHMP24386 653 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 CRISP1P54107 249 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 TAS2R50P59544 299 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 DSTNP60981 165 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 TAP2Q03519 686 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 COLEC12Q5KU26 742 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 TMEM215Q68D42 235 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF770Q6IQ21 691 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-201ENST00000277198 GDPGP1Q6ZNW5 385 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 FAM46DQ8NEK8 389 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 B3GNT7Q8NFL0 401 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 DTD2Q96FN9 168 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 COQ10AQ96MF6 247 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 NLNQ9BYT8 704 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 AMBNQ9NP70 447 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 CCDC177Q9NQR7 707 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-201ENST00000277198 PRMT8Q9NR22 394 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-201ENST00000277198 FTSJ1Q9UET6 329 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 DSPPQ9NZW4 1301 aa12.28□□□□□ -0.44
C9orf3-201ENST00000277198 PTPRZ1P23471 2315 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-201ENST00000277198 A0A075B6Q4 140 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 PRAMEF33A0A0G2JMD5 474 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 TRBC2A0A5B9 178 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 LOC110117498-PIK3R3F6TDL0 507 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 CCRL2O00421 344 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 HAT1O14929 419 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 PRAMEF10O60809 474 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 LILRB5O75023 590 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 PDE9AO76083 593 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 KLHL18O94889 574 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 SEMA3DO95025 777 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 NFATC1O95644 943 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 TGFB1P01137 390 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 DBTP11182 482 aaKnown RBP12.27□□□□□ -0.44
C9orf3-201ENST00000277198 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-201ENST00000277198 TGFBR1P36897 503 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 NBL1P41271 181 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 SLC15A1P46059 708 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 GSTM5P46439 218 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 DEFA1P59665 94 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 DEFA3P59666 94 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 SNRPGP62308 76 aaKnown RBP12.27□□□□□ -0.44
C9orf3-201ENST00000277198 RHAGQ02094 409 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 MEDAGQ5VYS4 303 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 RNLSQ5VYX0 342 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 STEAP3Q658P3 488 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 PLAG1Q6DJT9 500 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 CFAP206Q8IYR0 622 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 KRT78Q8N1N4 520 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 PARP16Q8N5Y8 322 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 SCAIQ8N9R8 606 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 IL17RCQ8NAC3 791 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 AQP11Q8NBQ7 271 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 OR9Q2Q8NGE9 314 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 RASSF5Q8WWW0 418 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 PIK3R3Q92569 461 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 HPS1Q92902 700 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 FOXJ1Q92949 421 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 CIDECQ96AQ7 238 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-201ENST00000277198 MSANTD3Q96H12 275 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF764Q96H86 408 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-201ENST00000277198 A4GALTQ9NPC4 353 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 FZD3Q9NPG1 666 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 MIEF1Q9NQG6 463 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 ABCB10Q9NRK6 738 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 GPR34Q9UPC5 381 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 MAP4K5Q9Y4K4 846 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 PCDHGA4Q9Y5G9 962 aa12.27□□□□□ -0.44
C9orf3-201ENST00000277198 CFAP20Q9Y6A4 193 aaKnown RBP12.27□□□□□ -0.44
C9orf3-201ENST00000277198 DMXL1Q9Y485 3027 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 PCDH17O14917 1159 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 ZW10O43264 779 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 SH3BGRLO75368 114 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 ADH5P11766 374 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 TNFRSF1BP20333 461 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 GSSP48637 474 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 SEC13P55735 322 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 ILKQ13418 452 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 LCTLQ6UWM7 567 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 PTCHD4Q6ZW05 846 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 TAGAPQ8N103 731 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 POC5Q8NA72 575 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 WDR48Q8TAF3 677 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 APOBEC4Q8WW27 367 aaKnown RBP12.27□□□□□ -0.45
C9orf3-201ENST00000277198 OR5P2Q8WZ92 322 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 NEURL3Q96EH8 262 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 TRNT1Q96Q11 434 aaKnown RBP12.27□□□□□ -0.45
C9orf3-201ENST00000277198 MGLLQ99685 303 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 CCDC32Q9BV29 185 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 SLC6A16Q9GZN6 736 aa12.27□□□□□ -0.45
C9orf3-201ENST00000277198 OR51B5Q9H339 312 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms