RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 OR4N4Q8N0Y3 316 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 DEFB119Q8N690 84 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SMYD1Q8NB12 490 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 CAMKVQ8NCB2 501 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 BAHD1Q8TBE0 780 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SFXN5Q8TD22 340 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 XAGE5Q8WWM1 108 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 GEMIN6Q8WXD5 167 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 TMIGD2Q96BF3 282 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 TMEM19Q96HH6 336 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SLC35G5Q96KT7 338 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF681Q96N22 645 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SERINC2Q96SA4 455 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 TSC22D3Q99576 134 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 KLHL25Q9H0H3 589 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 RBM38Q9H0Z9 239 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ING2Q9H160 280 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 OR51I1Q9H343 314 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 SEMA3GQ9NS98 782 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ZCCHC3Q9NUD5 404 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 KCMF1Q9P0J7 381 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 THEGQ9P2T0 379 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 ENTPD4Q9Y227 616 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 TESMINQ9Y4I5 508 aa9.06□□□□□ -0.96
TRIM55-201ENST00000276573 MDC1Q14676 2089 aaKnown RBP9.06□□□□□ -0.96
TRIM55-201ENST00000276573 UNC80Q8N2C7 3258 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 A0A0J9YY10 115 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 PRAMEF27A3QJZ7 478 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 URADA6NGE7 173 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 H0YGG7 62 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 H3BSA7 217 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 SOX1O00570 391 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 ADAMDEC1O15204 470 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 P2RX6O15547 441 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 NDUFS2O75306 463 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 JRKO75564 520 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 MFN2O95140 757 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 WNT1P04628 370 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 PVRP15151 417 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 CD247P20963 164 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 CD27P26842 260 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 RYKP34925 604 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 HLCSP50747 726 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 RPS6KA3P51812 740 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 TPD52P55327 224 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 ARF3P61204 181 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 RUNX2Q13950 521 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 SUZ12Q15022 739 aaKnown RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 CEBPEQ15744 281 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 GPR19Q15760 415 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 MEP1AQ16819 746 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 RPS26P11Q5JNZ5 115 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 FRMPD2BQ6IN97 320 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 PARGQ86W56 976 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 SLC44A2Q8IWA5 706 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 RBM12BQ8IXT5 1001 aaKnown RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 ATG16L2Q8NAA4 619 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 CHDHQ8NE62 594 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 GIPC3Q8TF64 312 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 ZDHHC1Q8WTX9 485 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 NCSTNQ92542 709 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 HDAC2Q92769 488 aaKnown RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 MAGED4Q96JG8 741 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 C10orf90Q96M02 699 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 NELL2Q99435 816 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 ZFYVE21Q9BQ24 234 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 RSPO3Q9BXY4 272 aaPredicted RBP9.05□□□□□ -0.96
TRIM55-201ENST00000276573 GIMAP4Q9NUV9 329 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 EVA1BQ9NVM1 165 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 TRPC4Q9UBN4 977 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 WNT16Q9UBV4 365 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 SH3GLB1Q9Y371 365 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF451Q9Y4E5 1061 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 LYVE1Q9Y5Y7 322 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF780BQ9Y6R6 833 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 ENPP4Q9Y6X5 453 aa9.05□□□□□ -0.96
TRIM55-201ENST00000276573 A0A1W2PR77 199 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 A0A1W2PS29 197 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 EMC8O43402 210 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 DNAJB6O75190 326 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 DNAJB5O75953 348 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 PDE9AO76083 593 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 RECKO95980 971 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 NR2F6P10588 404 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 ALPPL2P10696 532 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CDH2P19022 906 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CPN2P22792 545 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CD38P28907 300 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 GSTT1P30711 240 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 XCR1P46094 333 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 YAP1P46937 504 aaKnown RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 PXNP49023 591 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CLK3P49761 638 aaKnown RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 HMGA2P52926 109 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 PRKAG1P54619 331 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 IL1RL1Q01638 556 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 HHEXQ03014 270 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 CD47Q08722 323 aa9.04□□□□□ -0.96
TRIM55-201ENST00000276573 SIM2Q14190 667 aaPredicted RBP9.04□□□□□ -0.96
TRIM55-201ENST00000276573 PUM1Q14671 1186 aaKnown RBP eCLIP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms