RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RPS5P46782 204 aaKnown RBP26.12■■□□□ 1.77
CBX4-201ENST00000269397 MLLT11Q13015 90 aaPredicted RBP26.12■■□□□ 1.77
CBX4-201ENST00000269397 MFSD4BQ5TF39 518 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 SAXO2Q658L1 398 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 OLIG3Q7RTU3 272 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 C11orf74Q86VG3 221 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 CRIPAKQ8N1N5 446 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 RPRD1BQ9NQG5 326 aaKnown RBP26.12■■□□□ 1.77
CBX4-201ENST00000269397 INSL5Q9Y5Q6 135 aa26.12■■□□□ 1.77
CBX4-201ENST00000269397 GOLGA4Q13439 2230 aaKnown RBP26.12■■□□□ 1.77
CBX4-201ENST00000269397 PLA2G10O15496 165 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 PIN1Q13526 163 aaPredicted RBP26.11■■□□□ 1.77
CBX4-201ENST00000269397 C12orf73Q69YU5 71 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 PGBD2Q6P3X8 592 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 VWA5B2Q8N398 1253 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 SLC7A13Q8TCU3 470 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 FOPNLQ96NB1 174 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 FRMD6Q96NE9 622 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 TM9SF2Q99805 663 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 CPEB1Q9BZB8 566 aaKnown RBP26.11■■□□□ 1.77
CBX4-201ENST00000269397 MYNNQ9NPC7 610 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 SLAMF7Q9NQ25 335 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 RNF186Q9NXI6 227 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 MKI67P46013 3256 aaKnown RBP26.11■■□□□ 1.77
CBX4-201ENST00000269397 SLC5A10A0PJK1 596 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 OR6C70A6NIJ9 312 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 ATG13O75143 517 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 OLFM2O95897 454 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 YES1P07947 543 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 DGKGP49619 791 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 PCDH1Q08174 1060 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 SLC35F1Q5T1Q4 408 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 SPOUT1Q5T280 376 aaKnown RBP26.11■■□□□ 1.77
CBX4-201ENST00000269397 PPP2R2DQ66LE6 453 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 LYPD8Q6UX82 237 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 ATP6V1C2Q8NEY4 427 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 OR7G1Q8NGA0 311 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 OR8J1Q8NGP2 316 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 REPS1Q96D71 796 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 C1GALT1C1Q96EU7 318 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 TMEM169Q96HH4 297 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 MRPL17Q9NRX2 175 aaKnown RBP26.11■■□□□ 1.77
CBX4-201ENST00000269397 SEMA3GQ9NS98 782 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 RTCAO00442 366 aaKnown RBP26.11■■□□□ 1.77
CBX4-201ENST00000269397 CPNE3O75131 537 aaKnown RBP26.11■■□□□ 1.77
CBX4-201ENST00000269397 H1F0P07305 194 aaKnown RBP26.11■■□□□ 1.77
CBX4-201ENST00000269397 CTSAP10619 480 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP26.11■■□□□ 1.777e-8■■■□□ 18.2
CBX4-201ENST00000269397 TMEM201Q5SNT2 666 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 XKRXQ6PP77 449 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 OR52I1Q8NGK6 324 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 RACGAP1Q9H0H5 632 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 RNF121Q9H920 327 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 CTPS2Q9NRF8 586 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 DYRK1BQ9Y463 629 aa26.11■■□□□ 1.77
CBX4-201ENST00000269397 ALX3O95076 343 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 RPS25P62851 125 aaKnown RBP26.1■■□□□ 1.77
CBX4-201ENST00000269397 RDH10Q8IZV5 341 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 ZFP41Q8N8Y5 198 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 NDRG2Q9UN36 371 aaKnown RBP26.1■■□□□ 1.77
CBX4-201ENST00000269397 KIAA1671Q9BY89 1806 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 EFEMP2O95967 443 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 C1GALT1C1LP0DN25 315 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 CHRNB1P11230 501 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 APEX1P27695 318 aaKnown RBP26.1■■□□□ 1.77
CBX4-201ENST00000269397 TMEM115Q12893 351 aaPredicted RBP26.1■■□□□ 1.77
CBX4-201ENST00000269397 YIF1BQ5BJH7 314 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 TPGS2Q68CL5 300 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 OR2A12Q8NGT7 310 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 SORCS1Q8WY21 1168 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 PDXPQ96GD0 296 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 ACAT2Q9BWD1 397 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 LINC00597Q9H2U6 94 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 COMMD3Q9UBI1 195 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 SLC25A13Q9UJS0 675 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 MGAT4BQ9UQ53 548 aa26.1■■□□□ 1.77
CBX4-201ENST00000269397 C1orf105O95561 183 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 POLR2LP62875 67 aaKnown RBP26.09■■□□□ 1.77
CBX4-201ENST00000269397 HSPB3Q12988 150 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 HENMT1Q5T8I9 393 aaKnown RBP26.09■■□□□ 1.77
CBX4-201ENST00000269397 HTR3DQ70Z44 454 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 CFAP206Q8IYR0 622 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 ENKURQ8TC29 256 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 BTN2A2Q8WVV5 523 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 GATAD2BQ8WXI9 593 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 LRR1Q96L50 414 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 HCN2Q9UL51 889 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 LEFTY1O75610 366 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 UQCRC2P22695 453 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 WDR5P61964 334 aaKnown RBP26.09■■□□□ 1.77
CBX4-201ENST00000269397 SYCE2Q6PIF2 218 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 SHFQ7M4L6 423 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 PDZD3Q86UT5 571 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 NRTNQ99748 197 aa26.09■■□□□ 1.77
CBX4-201ENST00000269397 TRAV19A0A0A6YYK7 116 aa26.08■■□□□ 1.77
CBX4-201ENST00000269397 VIPR1P32241 457 aa26.08■■□□□ 1.77
CBX4-201ENST00000269397 TLE2Q04725 743 aa26.08■■□□□ 1.77
CBX4-201ENST00000269397 DDI2Q5TDH0 399 aa26.08■■□□□ 1.77
CBX4-201ENST00000269397 ERAP2Q6P179 960 aa26.08■■□□□ 1.77
CBX4-201ENST00000269397 COMTD1Q86VU5 262 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms