RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SLC9A3P48764 834 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 CTSCP53634 463 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 UGT3A2Q3SY77 523 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 TMEM19Q96HH6 336 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 INPP5KQ9BT40 448 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 TPSD1Q9BZJ3 242 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 PELI2Q9HAT8 420 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 MARCH5Q9NX47 278 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 GNG8Q9UK08 70 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 CA14Q9ULX7 337 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 EXOSC1Q9Y3B2 195 aaKnown RBP13.37□□□□□ -0.27
CDH3-201ENST00000264012 A0A1B0GVT2 93 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 HCRTR2O43614 444 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 CYB5AP00167 134 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 OXTRP30559 389 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 ZXDBP98169 803 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 PIGFQ07326 219 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 LSAMPQ13449 338 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 COL9A2Q14055 689 aaPredicted RBP13.36□□□□□ -0.27
CDH3-201ENST00000264012 UAP1L1Q3KQV9 507 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 NDUFAF5Q5TEU4 345 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 QSOX2Q6ZRP7 698 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 SCML1Q9UN30 329 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 HHLA1C9JL84 531 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 NUAK1O60285 661 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 THEGLP0DJG4 465 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 GPX3P22352 226 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 HNRNPA2B1P22626 353 aaKnown RBP13.36□□□□□ -0.27
CDH3-201ENST00000264012 CBLP22681 906 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 CBX5P45973 191 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 SLC6A9P48067 706 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 RNF144AP50876 292 aaPredicted RBP13.36□□□□□ -0.27
CDH3-201ENST00000264012 TPTEP56180 551 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 LARP4Q71RC2 724 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDH3-201ENST00000264012 OR2L5Q8NG80 312 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 OR51A7Q8NH64 312 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 PHOSPHO2Q8TCD6 241 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 HIST1H2AAQ96QV6 131 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 TMEM45AQ9NWC5 275 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 FAM118AQ9NWS6 357 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 C5AR2Q9P296 337 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 MUSKO15146 869 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 SORBS2O94875 1100 aaKnown RBP13.36□□□□□ -0.27
CDH3-201ENST00000264012 MT-ND5P03915 603 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 CRISP1P54107 249 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 HHEXQ03014 270 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 FAM180BQ6P0A1 224 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 TUBA3EQ6PEY2 450 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 RTL10Q7L3V2 364 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 LNX2Q8N448 690 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 DTWD1Q8N5C7 304 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 OR2T33Q8NG76 320 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 OR8J1Q8NGP2 316 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 NEIL2Q969S2 332 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 ISOC1Q96CN7 298 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 ECHDC3Q96DC8 303 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 SLC22A4Q9H015 551 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 SOX1O00570 391 aaPredicted RBP13.36□□□□□ -0.27
CDH3-201ENST00000264012 DUX1O43812 170 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 OR2B3O76000 313 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 CYP17A1P05093 508 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 ZNF182P17025 639 aaPredicted RBP13.36□□□□□ -0.27
CDH3-201ENST00000264012 SLC15A1P46059 708 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 RAB39AQ14964 217 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 ZNF852Q6ZMS4 543 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 ASB18Q6ZVZ8 466 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 FEVQ99581 238 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 KLHL42Q9P2K6 505 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 UPB1Q9UBR1 384 aa13.36□□□□□ -0.27
CDH3-201ENST00000264012 C2orf92A0A1B0GVN3 265 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 OR52A4PA6NMU1 304 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 PEX12O00623 359 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 BMP2P12643 396 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 NR2C1P13056 603 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 SDC1P18827 310 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 USP53Q70EK8 1073 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 ZNF675Q8TD23 568 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 TMEM125Q96AQ2 219 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 RTP3Q9BQQ7 232 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 PTGES2Q9H7Z7 377 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 BRF2Q9HAW0 419 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 ANKMY1Q9P2S6 941 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 ERVK-18Q9QC07 812 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 SEC14L4Q9UDX3 406 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 CNOT11Q9UKZ1 510 aaKnown RBP13.35□□□□□ -0.27
CDH3-201ENST00000264012 SARDHQ9UL12 918 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 ANKRD12Q6UB98 2062 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 DENRO43583 198 aaKnown RBP13.35□□□□□ -0.27
CDH3-201ENST00000264012 F8A1P23610 371 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 HSD11B1P28845 292 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 ZNF41P51814 821 aaPredicted RBP13.35□□□□□ -0.27
CDH3-201ENST00000264012 IST1P53990 364 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 PDZD3Q86UT5 571 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 GRPEL2Q8TAA5 225 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 C3orf30Q96M34 536 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 NTMT1Q9BV86 223 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 B3GNT4Q9C0J1 378 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 NRAPQ86VF7 1730 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 CCRL2O00421 344 aa13.35□□□□□ -0.27
CDH3-201ENST00000264012 LSM1O15116 133 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms