RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 AREL1O15033 823 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 JRKO75564 520 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 ETHE1O95571 254 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 MNX1P50219 401 aaPredicted RBP15.52■□□□□ 0.08
CTCF-201ENST00000264010 ZNF740Q8NDX6 193 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 TOR1AIP2Q8NFQ8 470 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 COL21A1Q96P44 957 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 MBOAT4Q96T53 435 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 SGPP1Q9BX95 441 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 XKR8Q9H6D3 395 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 DIABLOQ9NR28 239 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 OR1A2Q9Y585 309 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 HEBP2Q9Y5Z4 205 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 ZNF780BQ9Y6R6 833 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 PIKFYVEQ9Y2I7 2098 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 TMX2-CTNND1H3BSU7 103 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 SCAMP1O15126 338 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 MPZL2O60487 215 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 UGT2B17O75795 530 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 FURINP09958 794 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 PSKH1P11801 424 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 RPS21P63220 83 aaKnown RBP15.52■□□□□ 0.08
CTCF-201ENST00000264010 LRRC32Q14392 662 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 TIMM50Q3ZCQ8 353 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 ADNP2Q6IQ32 1131 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 ADAMTSL4Q6UY14 1074 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 SLC9B2Q86UD5 537 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 PJA1Q8NG27 643 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 AKAP1Q92667 903 aaKnown RBP eCLIP15.52■□□□□ 0.08
CTCF-201ENST00000264010 HDAC8Q9BY41 377 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 PRSS16Q9NQE7 514 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 NKIRAS2Q9NYR9 191 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 CLCA2Q9UQC9 943 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 ERGIC3Q9Y282 383 aa15.52■□□□□ 0.08
CTCF-201ENST00000264010 ZFC3H1O60293 1989 aaKnown RBP15.52■□□□□ 0.07
CTCF-201ENST00000264010 PRAMEF4O60810 478 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 KDM4BO94953 1096 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 IFNGR2P38484 337 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 BUD31P41223 144 aaPredicted RBP15.52■□□□□ 0.07
CTCF-201ENST00000264010 PRAMEF9Q5VWM5 478 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 CCBE1Q6UXH8 406 aaPredicted RBP15.52■□□□□ 0.07
CTCF-201ENST00000264010 CEP68Q76N32 757 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 LCN9Q8WX39 176 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 ARMC5Q96C12 935 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 CNDP2Q96KP4 475 aaKnown RBP15.52■□□□□ 0.07
CTCF-201ENST00000264010 PIP5K1AQ99755 562 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 KXD1Q9BQD3 176 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 FUNDC2Q9BWH2 189 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 ZNF624Q9P2J8 865 aaPredicted RBP15.52■□□□□ 0.07
CTCF-201ENST00000264010 P2RX2Q9UBL9 471 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 ANKRD36A6QL64 1941 aa15.52■□□□□ 0.07
CTCF-201ENST00000264010 FEZF1A0PJY2 475 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 MT-ND2P03891 347 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 TSPAN19P0C672 248 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 ATXN8OSP0DMR3 200 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 DAPP51397 102 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 NCBP2P52298 156 aaKnown RBP eCLIP15.51■□□□□ 0.077e-8■□□□□ 9.4
CTCF-201ENST00000264010 OLR1P78380 273 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 MED22Q15528 200 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 CYP27C1Q4G0S4 372 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 LAS2Q8IYD9 372 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 SYNPOQ8N3V7 929 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 OR13F1Q8NGS4 319 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 ITPKCQ96DU7 683 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 SORBS1Q9BX66 1292 aaKnown RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 ZDHHC5Q9C0B5 715 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 ING3Q9NXR8 418 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 FBXW2Q9UKT8 454 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 H3BUI4 141 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 UPK1AO00322 258 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 ERI3O43414 337 aaKnown RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 SNX4O95219 450 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 MYOGP15173 224 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 JUNBP17275 347 aaPredicted RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 VASPP50552 380 aaPredicted RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 ALDH6A1Q02252 535 aaKnown RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 EXOC3L2Q2M3D2 409 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 KIAA0907Q7Z7F0 614 aaPredicted RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 ALPK1Q96QP1 1244 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 FBXO10Q9UK96 956 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 CDH7Q9ULB5 785 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 MYO9BQ13459 2157 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 NRG2O14511 850 aaPredicted RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 TNFRSF1BP20333 461 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 ZNF10P21506 573 aaPredicted RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 TLX1P31314 330 aaPredicted RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 GJA4P35212 333 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 KHKP50053 298 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 METAP1P53582 386 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 STXBP1P61764 594 aaKnown RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 C1DQ13901 141 aaKnown RBP15.51■□□□□ 0.07
CTCF-201ENST00000264010 KBTBD8Q8NFY9 601 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 ADAMTS16Q8TE57 1224 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 RAB8BQ92930 207 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 PHOX2BQ99453 314 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 MAPKAP1Q9BPZ7 522 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 C17orf62Q9BQA9 187 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 SLC6A16Q9GZN6 736 aa15.51■□□□□ 0.07
CTCF-201ENST00000264010 CD36P16671 472 aa15.5■□□□□ 0.07
CTCF-201ENST00000264010 DDCP20711 480 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms