RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 HTR2BP41595 481 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 SNRPGP62308 76 aaKnown RBP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 HSPB3Q12988 150 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 ASAH1Q13510 395 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 CRTC2Q53ET0 693 aaPredicted RBP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 MPPE1Q53F39 396 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 TYW3Q6IPR3 259 aaKnown RBP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 FAM71E1Q6IPT2 247 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 TCTN3Q6NUS6 607 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 FIBINQ8TAL6 211 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 ELAC1Q9H777 363 aaKnown RBP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 FZD3Q9NPG1 666 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 STARD7Q9NQZ5 370 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 TAAR2Q9P1P5 351 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 DSPPQ9NZW4 1301 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 IQCMA0A1B0GVH7 501 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 NPC1O15118 1278 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 PLA2G10O15496 165 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 ABLIM3O94929 683 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 H1F0P07305 194 aaKnown RBP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 NPPBP16860 134 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 RPS5P46782 204 aaKnown RBP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 DGKGP49619 791 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 MAN2A2P49641 1150 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 EPHB3P54753 998 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 UBE3AQ05086 875 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 ILKQ13418 452 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 SPDYE7PQ495Y7 208 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 FLYWCH1Q4VC44 716 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 SLC35F1Q5T1Q4 408 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 DDI2Q5TDH0 399 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 MEDAGQ5VYS4 303 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 XKRXQ6PP77 449 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 GDPD4Q6W3E5 623 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 YIPF7Q8N8F6 280 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 TP53I13Q8NBR0 393 aaPredicted RBP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 OR52I1Q8NGK6 324 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 TRMT2BQ96GJ1 504 aaKnown RBP16.59■□□□□ 0.25
TRAM1-201ENST00000262213 SCLYQ96I15 445 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 TRPV5Q9NQA5 729 aa16.59■□□□□ 0.25
TRAM1-201ENST00000262213 ERVH48-1M5A8F1 160 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 CST5P28325 142 aaPredicted RBP16.58■□□□□ 0.25
TRAM1-201ENST00000262213 RAB25P57735 213 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 GPLD1P80108 840 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 MLLT11Q13015 90 aaPredicted RBP16.58■□□□□ 0.25
TRAM1-201ENST00000262213 MFSD4BQ5TF39 518 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 ASTLQ6HA08 431 aaPredicted RBP16.58■□□□□ 0.25
TRAM1-201ENST00000262213 PGBD2Q6P3X8 592 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 GDPGP1Q6ZNW5 385 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 PROKR2Q8NFJ6 384 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 CXorf40BQ96DE9 158 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 METTL2AQ96IZ6 378 aaKnown RBP16.58■□□□□ 0.25
TRAM1-201ENST00000262213 LRR1Q96L50 414 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 WDFY2Q96P53 400 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 GFM1Q96RP9 751 aaKnown RBP16.58■□□□□ 0.25
TRAM1-201ENST00000262213 TMEM175Q9BSA9 504 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 MRPL9Q9BYD2 267 aaKnown RBP16.58■□□□□ 0.25
TRAM1-201ENST00000262213 TMEM39AQ9NV64 488 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 BACE2Q9Y5Z0 518 aa16.58■□□□□ 0.25
TRAM1-201ENST00000262213 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.58■□□□□ 0.24
TRAM1-201ENST00000262213 NRG2O14511 850 aaPredicted RBP16.58■□□□□ 0.24
TRAM1-201ENST00000262213 TPD52L2O43399 206 aaKnown RBP16.58■□□□□ 0.24
TRAM1-201ENST00000262213 ATG13O75143 517 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 LATS1O95835 1130 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 GNG2P59768 71 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 TLE2Q04725 743 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 CCDC85BQ15834 202 aaPredicted RBP16.58■□□□□ 0.24
TRAM1-201ENST00000262213 YIF1BQ5BJH7 314 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 CCDC149Q6ZUS6 474 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 PDZD3Q86UT5 571 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 CFAP206Q8IYR0 622 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 NLGN4YQ8NFZ3 816 aaPredicted RBP16.58■□□□□ 0.24
TRAM1-201ENST00000262213 OR8J1Q8NGP2 316 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 OR52P1PQ8NH57 321 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 SORCS1Q8WY21 1168 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 REPS1Q96D71 796 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 SLA2Q9H6Q3 261 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 GPR52Q9Y2T5 361 aa16.58■□□□□ 0.24
TRAM1-201ENST00000262213 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.57■□□□□ 0.24
TRAM1-201ENST00000262213 M0R3H8 397 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 NME6O75414 186 aaPredicted RBP16.57■□□□□ 0.24
TRAM1-201ENST00000262213 NCR1O76036 304 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 ENDOUP21128 410 aaKnown RBP16.57■□□□□ 0.24
TRAM1-201ENST00000262213 ELOAQ14241 798 aaKnown RBP16.57■□□□□ 0.24
TRAM1-201ENST00000262213 FAM209AQ5JX71 171 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 BRAT1Q6PJG6 821 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 PLET1Q6UQ28 207 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 LAPTM4BQ86VI4 370 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 SLC7A13Q8TCU3 470 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 IL17FQ96PD4 163 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 NRTNQ99748 197 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 GDF15Q99988 308 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 SLAMF7Q9NQ25 335 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 MRPL17Q9NRX2 175 aaKnown RBP16.57■□□□□ 0.24
TRAM1-201ENST00000262213 SLC25A13Q9UJS0 675 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 KCND3Q9UK17 655 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 HCN2Q9UL51 889 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 PLAGL1Q9UM63 463 aa16.57■□□□□ 0.24
TRAM1-201ENST00000262213 MGAT4BQ9UQ53 548 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms