RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 NEUROD4Q9HD90 331 aa14.47□□□□□ -0.09
DDX56-201ENST00000258772 SIRT3Q9NTG7 399 aaPredicted RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 CRNNQ9UBG3 495 aaPredicted RBP14.47□□□□□ -0.09
DDX56-201ENST00000258772 HEATR5BQ9P2D3 2071 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 H3BN98 237 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 CAPN5O15484 640 aaPredicted RBP14.46□□□□□ -0.09
DDX56-201ENST00000258772 PDE9AO76083 593 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 CYP17A1P05093 508 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 RPS19P39019 145 aaKnown RBP14.46□□□□□ -0.09
DDX56-201ENST00000258772 SOX3P41225 446 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 CNTN1Q12860 1018 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 LRIT3Q3SXY7 679 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 C12orf73Q69YU5 71 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 CASP12Q6UXS9 341 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 SLC34A3Q8N130 599 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 VANGL1Q8TAA9 524 aaPredicted RBP14.46□□□□□ -0.09
DDX56-201ENST00000258772 CEP19Q96LK0 163 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 LRRC3BQ96PB8 259 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 SLC30A2Q9BRI3 323 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 ASPNQ9BXN1 380 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 POLR2J3Q9H1A7 115 aaKnown RBP14.46□□□□□ -0.09
DDX56-201ENST00000258772 EXOSC4Q9NPD3 245 aaKnown RBP14.46□□□□□ -0.09
DDX56-201ENST00000258772 TAC3Q9UHF0 121 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 TMEM98Q9Y2Y6 226 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 IRAK3Q9Y616 596 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 PTPRSQ13332 1948 aa14.46□□□□□ -0.09
DDX56-201ENST00000258772 NUMA1Q14980 2115 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 PDZK1P1A8MUH7 402 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 ANHXE9PGG2 379 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 SLC9A3R1O14745 358 aaPredicted RBP14.46□□□□□ -0.1
DDX56-201ENST00000258772 ASNA1O43681 348 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 VEGFDO43915 354 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 CSO75390 466 aaKnown RBP14.46□□□□□ -0.1
DDX56-201ENST00000258772 CCL5P13501 91 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 TNFSF8P32971 234 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 FRKP42685 505 aaPredicted RBP14.46□□□□□ -0.1
DDX56-201ENST00000258772 MESP2Q0VG99 397 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 SPHARQ15513 63 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 SPDYE7PQ495Y7 208 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 PLPP4Q5VZY2 271 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 PGBD2Q6P3X8 592 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 PDZD3Q86UT5 571 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 TMIEQ8NEW7 156 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 FLCNQ8NFG4 579 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 WFIKKN2Q8TEU8 576 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 SMPDL3AQ92484 453 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 TFGQ92734 400 aaPredicted RBP14.46□□□□□ -0.1
DDX56-201ENST00000258772 TEFMQ96QE5 360 aaKnown RBP14.46□□□□□ -0.1
DDX56-201ENST00000258772 AIF1LQ9BQI0 150 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 CCDC32Q9BV29 185 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 C3orf14Q9HBI5 128 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 DYRK4Q9NR20 520 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 CUEDC1Q9NWM3 386 aaPredicted RBP14.46□□□□□ -0.1
DDX56-201ENST00000258772 ERVK13-1Q9NX77 482 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 ACAD8Q9UKU7 415 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 RPL36Q9Y3U8 105 aaKnown RBP14.46□□□□□ -0.1
DDX56-201ENST00000258772 SNX11Q9Y5W9 270 aa14.46□□□□□ -0.1
DDX56-201ENST00000258772 GOLGA4Q13439 2230 aaKnown RBP14.45□□□□□ -0.1
DDX56-201ENST00000258772 CLTBP09497 229 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 ADH5P11766 374 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 ADRB3P13945 408 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 ENDOUP21128 410 aaKnown RBP14.45□□□□□ -0.1
DDX56-201ENST00000258772 CXCR2P25025 360 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 TIE1P35590 1138 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 BCL2A1Q16548 175 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 TCEAL5Q5H9L2 206 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 C9orf64Q5T6V5 341 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 C1orf53Q5VUE5 145 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 GDPGP1Q6ZNW5 385 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 DCUN1D3Q8IWE4 304 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 TCEANCQ8N8B7 351 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 OR8J1Q8NGP2 316 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 SLC7A13Q8TCU3 470 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 CHAC2Q8WUX2 184 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 NXPE3Q969Y0 559 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 EXOSC8Q96B26 276 aaKnown RBP14.45□□□□□ -0.1
DDX56-201ENST00000258772 SLC6A18Q96N87 628 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 ZNF607Q96SK3 696 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 PELI2Q9HAT8 420 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 SEMA3GQ9NS98 782 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 C14orf119Q9NWQ9 140 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 SEC14L3Q9UDX4 400 aa14.45□□□□□ -0.1
DDX56-201ENST00000258772 FEZF1A0PJY2 475 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 HEPACAM2A8MVW5 462 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 CACNB4O00305 520 aaPredicted RBP14.44□□□□□ -0.1
DDX56-201ENST00000258772 EFCAB14O75071 495 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 APOA1P02647 267 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 GSTT2P0CG29 244 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 GSTT2BP0CG30 244 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 PSMA1P25786 263 aaKnown RBP14.44□□□□□ -0.1
DDX56-201ENST00000258772 CRYBB2P43320 205 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 CCT3P49368 545 aaKnown RBP14.44□□□□□ -0.1
DDX56-201ENST00000258772 TARDBPQ13148 414 aaKnown RBP eCLIP14.44□□□□□ -0.1
DDX56-201ENST00000258772 TMEM53Q6P2H8 277 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 KRT73Q86Y46 540 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 NANOGP1Q8N7R0 232 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 MRPL43Q8N983 215 aaKnown RBP14.44□□□□□ -0.1
DDX56-201ENST00000258772 RASSF5Q8WWW0 418 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 ING5Q8WYH8 240 aa14.44□□□□□ -0.1
DDX56-201ENST00000258772 FUZQ9BT04 418 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms