RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 SQSTM1Q13501 440 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 TP53BP2Q13625 1128 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 KCNAB1Q14722 419 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 ZNF750Q32MQ0 723 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 COX20Q5RI15 118 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 PERM1Q5SV97 790 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 C6orf120Q7Z4R8 191 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 PTOV1Q86YD1 416 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 GPR135Q8IZ08 494 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 EID3Q8N140 333 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 LRRC25Q8N386 305 aaPredicted RBP17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 D2HGDHQ8N465 521 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 OR5T3Q8NGG3 340 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 FBXO30Q8TB52 745 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 TANKQ92844 425 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 MAGED4Q96JG8 741 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 RNF145Q96MT1 663 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 CSF3RQ99062 836 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 PKP2Q99959 881 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 DPYSL5Q9BPU6 564 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 NUDT22Q9BRQ3 303 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 TRIM4Q9C037 500 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 SYNDIG1Q9H7V2 258 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 FANCEQ9HB96 536 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 C3orf14Q9HBI5 128 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 SIRT3Q9NTG7 399 aaPredicted RBP17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 DCAF13Q9NV06 445 aaKnown RBP17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 SEMA5BQ9P283 1151 aa17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 SAMD4AQ9UPU9 718 aaKnown RBP17.65■□□□□ 0.42
TNFSF9-201ENST00000245817 LY6G6EA0A0G2JKS1 128 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 DNAJB6O75190 326 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 TIPRLO75663 272 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 NSA2O95478 260 aaKnown RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 CPNE6O95741 557 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 RPLP0P05388 317 aaKnown RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 HOXB6P17509 224 aaKnown RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 FASP25445 335 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 ANXA11P50995 505 aaKnown RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 EMP3P54852 163 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 COL9A2Q14055 689 aaPredicted RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 CEBPEQ15744 281 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 ADRM1Q16186 407 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 LRRC23Q53EV4 343 aaPredicted RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 TMEM64Q6YI46 380 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 ARHGEF39Q8N4T4 335 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 ADAMTS18Q8TE60 1221 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 LRTOMTQ8WZ04 291 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 COL26A1Q96A83 441 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 SLC41A2Q96JW4 573 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 C10orf90Q96M02 699 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 SPRTNQ9H040 489 aaPredicted RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 CHST8Q9H2A9 424 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 EPS8L2Q9H6S3 715 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 CLK4Q9HAZ1 481 aaKnown RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 ZCCHC3Q9NUD5 404 aaKnown RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 GPATCH2Q9NW75 528 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 SERTAD3Q9UJW9 196 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 RPS6KA6Q9UK32 745 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 MRPS33Q9Y291 106 aaKnown RBP17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 U3KQA8 63 aa17.64■□□□□ 0.42
TNFSF9-201ENST00000245817 FITM1A5D6W6 292 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 TMEM247A6NEH6 219 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 CHST10O43529 356 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 NUDT7P0C024 238 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 RNH1P13489 461 aaKnown RBP17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 NELFEP18615 380 aaKnown RBP17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 PCGF2P35227 344 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 MVDP53602 400 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 DSTNP60981 165 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 CCL7P80098 99 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 PRR5P85299 388 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 LRRC36Q1X8D7 754 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 ZNF630Q2M218 657 aaPredicted RBP17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 INAVAQ3KP66 663 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 INTS11Q5TA45 600 aaKnown RBP17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 CEACAM20Q6UY09 585 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 SLC30A8Q8IWU4 369 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 CATSPER1Q8NEC5 780 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 SUN3Q8TAQ9 357 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 SFXN5Q8TD22 340 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 MMABQ96EY8 250 aaPredicted RBP17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 ZNF681Q96N22 645 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 TMEM121BQ9BXQ6 578 aaPredicted RBP17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 KLHL4Q9C0H6 718 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 LRRN3Q9H3W5 708 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 SMOC1Q9H4F8 434 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 ZNF768Q9H5H4 540 aaKnown RBP17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 TMEM38AQ9H6F2 299 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 THUMPD1Q9NXG2 353 aaKnown RBP17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 RIMS3Q9UJD0 308 aa17.64■□□□□ 0.41
TNFSF9-201ENST00000245817 CYR61O00622 381 aa17.63■□□□□ 0.41
TNFSF9-201ENST00000245817 CASQ2O14958 399 aaPredicted RBP17.63■□□□□ 0.41
TNFSF9-201ENST00000245817 TPST1O60507 370 aa17.63■□□□□ 0.41
TNFSF9-201ENST00000245817 TNFRSF21O75509 655 aa17.63■□□□□ 0.41
TNFSF9-201ENST00000245817 RAP2AP10114 183 aa17.63■□□□□ 0.41
TNFSF9-201ENST00000245817 CKMT1AP12532 417 aa17.63■□□□□ 0.41
TNFSF9-201ENST00000245817 PORP16435 677 aaPredicted RBP17.63■□□□□ 0.41
TNFSF9-201ENST00000245817 PPP2R1BP30154 601 aa17.63■□□□□ 0.41
TNFSF9-201ENST00000245817 KDELR2P33947 212 aa17.63■□□□□ 0.41
TNFSF9-201ENST00000245817 PRKAG1P54619 331 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms