RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TREX1Q9NSU2 369 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 EIF3KQ9UBQ5 218 aaKnown RBP10.52□□□□□ -0.73
COPA-201ENST00000241704 GNB5O14775 395 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 AXIN1O15169 862 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 CAPN5O15484 640 aaPredicted RBP10.52□□□□□ -0.73
COPA-201ENST00000241704 TRIM3O75382 744 aaPredicted RBP10.52□□□□□ -0.73
COPA-201ENST00000241704 DIO3P55073 304 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 IFITM3Q01628 133 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 PTSQ03393 145 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 ZNF789Q5FWF6 425 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 TBPL2Q6SJ96 375 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 TMIGD1Q6UXZ0 262 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 TIGD4Q8IY51 512 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 CBARPQ8N350 705 aaPredicted RBP10.52□□□□□ -0.73
COPA-201ENST00000241704 RPLP0P6Q8NHW5 317 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 ZFAND1Q8TCF1 268 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 HCAR2Q8TDS4 363 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 SLC5A11Q8WWX8 675 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 SMPDL3BQ92485 455 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 RGMAQ96B86 450 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 ASPNQ9BXN1 380 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 GPR34Q9UPC5 381 aa10.52□□□□□ -0.73
COPA-201ENST00000241704 LINC01553A4QN01 128 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 SMAD6O43541 496 aaKnown RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 UGT2B17O75795 530 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 ARNTP27540 789 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 GSTM5P46439 218 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 RPL34P49207 117 aaKnown RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 TSPAN33Q86UF1 283 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 LSM14AQ8ND56 463 aaKnown RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 GPR151Q8TDV0 419 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 LRCH3Q96II8 777 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 ABCD2Q9UBJ2 740 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 MYO18AQ92614 2054 aaKnown RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 CLIC1O00299 241 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 CDK2AP1O14519 115 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 ADAMDEC1O15204 470 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 RFPL3O75679 317 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 GPLD1P80108 840 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 OR4F3Q6IEY1 312 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 SLC16A12Q6ZSM3 486 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 PTCHD4Q6ZW05 846 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 DEFB123Q8N688 67 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 CHST14Q8NCH0 376 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 OR10H5Q8NGA6 315 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 NARFLQ9H6Q4 476 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 PLCL2Q9UPR0 1127 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 PAPPA2Q9BXP8 1791 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 hCG_2039718K7EN88 272 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 TNFRSF11BO00300 401 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 VEGFDO43915 354 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 THEGLP0DJG4 465 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 ARSAP15289 507 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 CSNK2A2P19784 350 aaPredicted RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 FPR1P21462 350 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 NUP62P37198 522 aaPredicted RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 ERVFC1P60507 584 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 RPP38P78345 283 aaKnown RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 C10orf62Q5T681 223 aaPredicted RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 NADSYN1Q6IA69 706 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 SLC36A4Q6YBV0 504 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 LARP4Q71RC2 724 aaKnown RBP eCLIP10.51□□□□□ -0.73
COPA-201ENST00000241704 ADGRD2Q7Z7M1 963 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 TTC9Q92623 222 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 ISG20Q96AZ6 181 aaKnown RBP10.51□□□□□ -0.73
COPA-201ENST00000241704 TCEAL4Q96EI5 215 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 ZNF354BQ96LW1 612 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 SLC17A9Q9BYT1 436 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 ZNF385DQ9H6B1 395 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 SLC35C2Q9NQQ7 365 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 KLHL1Q9NR64 748 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 ANKRD31Q8N7Z5 1873 aa10.51□□□□□ -0.73
COPA-201ENST00000241704 INMT-MINDY4F8WBC2 141 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 PRSS56P0CW18 603 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 SAGP10523 405 aaPredicted RBP10.5□□□□□ -0.73
COPA-201ENST00000241704 GABRB3P28472 473 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 MPIP34949 423 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 OR4D1Q15615 310 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 ANKRD54Q6NXT1 300 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 ANKRD33Q7Z3H0 272 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 B3GNT8Q7Z7M8 397 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 FAM110BQ8TC76 370 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 SGCDQ92629 289 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 MR1Q95460 341 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 ISL2Q96A47 359 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 FYTTD1Q96QD9 318 aaKnown RBP10.5□□□□□ -0.73
COPA-201ENST00000241704 SLITRK2Q9H156 845 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 FZD3Q9NPG1 666 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 IL26Q9NPH9 171 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 ZCCHC3Q9NUD5 404 aaKnown RBP10.5□□□□□ -0.73
COPA-201ENST00000241704 CALML5Q9NZT1 146 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 PCDHB14Q9Y5E9 798 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 BRWD3Q6RI45 1802 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 FAM92AA1XBS5 289 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 CD1EP15812 388 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 GGT1P19440 569 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 HOXC12P31275 282 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 HOXC13P31276 330 aa10.5□□□□□ -0.73
COPA-201ENST00000241704 DCTP40126 519 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms