RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CRISP1P54107 249 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 CDC42P60953 191 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 SLC9A5Q14940 896 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 RAB30Q15771 203 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 RPE65Q16518 533 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 OR14C36Q8NHC7 312 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 UCN3Q969E3 161 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 MS4A6EQ96DS6 147 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 LGALS12Q96DT0 336 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 C17orf62Q9BQA9 187 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 KLHL31Q9H511 634 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 SLC28A3Q9HAS3 691 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 BCL2L10Q9HD36 194 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 SLC6A20Q9NP91 592 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 PRDM7Q9NQW5 492 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 P2RX2Q9UBL9 471 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 ASB4Q9Y574 426 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 GPC6Q9Y625 555 aaPredicted RBP15.31■□□□□ 0.04
UBE3D-201ENST00000237186 TRANK1O15050 2925 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 PRAMEF27A3QJZ7 478 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 TMEM247A6NEH6 219 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 CLDN25C9JDP6 229 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 ANHXE9PGG2 379 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 RFXAPO00287 272 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 PFDN1O60925 122 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 GUCY1B2O75343 617 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 HIST1H1TP22492 207 aaPredicted RBP15.31■□□□□ 0.04
UBE3D-201ENST00000237186 CHMP24386 653 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 NTSR1P30989 418 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 TIE1P35590 1138 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 OPRL1P41146 370 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 ILKQ13418 452 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 DGCR6Q14129 220 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 KRT33BQ14525 404 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 IRF3Q14653 427 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 FBXO43Q4G163 708 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 ATAT1Q5SQI0 421 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 KIAA1211LQ6NV74 962 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 C16orf87Q6PH81 154 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 KLHL17Q6TDP4 642 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 SLCO6A1Q86UG4 719 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 TAGAPQ8N103 731 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 OR2L5Q8NG80 312 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 OR2L3Q8NG85 312 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 NDNFQ8TB73 568 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 UTP15Q8TED0 518 aaKnown RBP15.31■□□□□ 0.04
UBE3D-201ENST00000237186 GTPBP3Q969Y2 492 aaKnown RBP15.31■□□□□ 0.04
UBE3D-201ENST00000237186 COL21A1Q96P44 957 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 TREX2Q9BQ50 279 aaPredicted RBP15.31■□□□□ 0.04
UBE3D-201ENST00000237186 FUZQ9BT04 418 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 RPP25Q9BUL9 199 aaKnown RBP15.31■□□□□ 0.04
UBE3D-201ENST00000237186 KIR3DX1Q9H7L2 352 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 AKIP1Q9NQ31 210 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 FBXO8Q9NRD0 319 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 LMCD1Q9NZU5 365 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 NDOR1Q9UHB4 597 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 MGAT4BQ9UQ53 548 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 HEBP2Q9Y5Z4 205 aa15.31■□□□□ 0.04
UBE3D-201ENST00000237186 TRBV4-1A0A0J9YWV2 114 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 OR52A4PA6NMU1 304 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 M0R082 166 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 KDM1AO60341 852 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 DNTTP04053 509 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 OR12D1P0DN82 309 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 CTSKP43235 329 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 SERPINB10P48595 397 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 GSSP48637 474 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 SMIM11AP58511 58 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 VBP1P61758 197 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 TMED1Q13445 227 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 TP53BP2Q13625 1128 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 ZNF846Q147U1 533 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 TMEM196Q5HYL7 178 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 TBC1D19Q8N5T2 526 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 SRFBP1Q8NEF9 429 aaKnown RBP15.3■□□□□ 0.04
UBE3D-201ENST00000237186 SFXN5Q8TD22 340 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 S100ZQ8WXG8 99 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 IMPAD1Q9NX62 359 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 TMCC3Q9ULS5 477 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 ERGIC3Q9Y282 383 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 GPSM3Q9Y4H4 160 aa15.3■□□□□ 0.04
UBE3D-201ENST00000237186 CKAP5Q14008 2032 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 PDZK1P1A8MUH7 402 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SH3BP5O60239 455 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SERPIND1P05546 499 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 OSMP13725 252 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 CD72P21854 359 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ATP5A1P25705 553 aaKnown RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ELAVL4P26378 380 aaKnown RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 PEBP1P30086 187 aaKnown RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 UGT2B10P36537 528 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SOX9P48436 509 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ADPRHP54922 357 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 DCST1Q5T197 706 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ZNF425Q6IV72 752 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 SLC44A2Q8IWA5 706 aaPredicted RBP15.29■□□□□ 0.04
UBE3D-201ENST00000237186 ACOT4Q8N9L9 421 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 GANCQ8TET4 914 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 CHPT1Q8WUD6 406 aa15.29■□□□□ 0.04
UBE3D-201ENST00000237186 MRPL38Q96DV4 380 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms