RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 PMEPA1Q969W9 287 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 PHF21AQ96BD5 680 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 ZNF689Q96CS4 500 aaPredicted RBP16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 SLC28A3Q9HAS3 691 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 ZNF224Q9NZL3 707 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 REV1Q9UBZ9 1251 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 NDOR1Q9UHB4 597 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 RWDD3Q9Y3V2 267 aa16.83■□□□□ 0.29
CDKN1B-201ENST00000228872 SGK494L7N484 410 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 LRRTM2O43300 516 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 EFCAB14O75071 495 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 OSMP13725 252 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 ITGB8P26012 769 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 IRS1P35568 1242 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 CYP4F8P98187 520 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 C12orf73Q69YU5 71 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 HDDC2Q7Z4H3 204 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 TAGAPQ8N103 731 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 LSM14AQ8ND56 463 aaKnown RBP16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 FBXO32Q969P5 355 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 C1GALT1C1Q96EU7 318 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 ZFP64Q9NPA5 681 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 ZFP37Q9Y6Q3 630 aaPredicted RBP16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 RPS10-NUDT3A0A1W2PQS6 291 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 ALPIP09923 528 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 HK1P19367 917 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 DDCP20711 480 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 AOAHP28039 575 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 TWF1Q12792 350 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 GALEQ14376 348 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 PLK5Q496M5 336 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 RTP2Q5QGT7 225 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 CEACAM20Q6UY09 585 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 MACC1Q6ZN28 852 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 LAPTM4BQ86VI4 370 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 VPS37AQ8NEZ2 397 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 TM9SF4Q92544 642 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 TOE1Q96GM8 510 aaKnown RBP16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 FOLH1BQ9HBA9 442 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 ZNF282Q9UDV7 671 aaPredicted RBP16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 PHF11Q9UIL8 331 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 RUVBL1Q9Y265 456 aaKnown RBP16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 NCKAP1Q9Y2A7 1128 aa16.83■□□□□ 0.28
CDKN1B-201ENST00000228872 ATP6V1G2-DDX39BF2Z307 99 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 CBX4O00257 560 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 ETV5P41161 510 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 EVX1P49640 407 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 ETV1P50549 477 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 GPR17Q13304 367 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 NFATC2Q13469 925 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 ZNF284Q2VY69 593 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 CRTC2Q53ET0 693 aaPredicted RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 CDKL4Q5MAI5 379 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 QSOX2Q6ZRP7 698 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 TRILQ7L0X0 811 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 ADGRG2Q8IZP9 1017 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.82■□□□□ 0.281e-8■■■■■ 32.7
CDKN1B-201ENST00000228872 C2orf15Q8WU43 125 aaKnown RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 UCN3Q969E3 161 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 SEPT5Q99719 369 aaPredicted RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 RC3H2Q9HBD1 1191 aaKnown RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 VPS29Q9UBQ0 182 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 DIMT1Q9UNQ2 313 aaKnown RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 PCDHB9Q9Y5E1 797 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 KIAA1671Q9BY89 1806 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 A0A0A6YYJ9 748 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 HEPACAM2A8MVW5 462 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 GTPBP1O00178 669 aaKnown RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 SLC9A3R1O14745 358 aaPredicted RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 ADAP00813 363 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 RHCEP18577 417 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 ACRV1P26436 265 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 PTBP1P26599 531 aaKnown RBP eCLIP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 GSTM5P46439 218 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 SLC6A12P48065 614 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 BTG1P62324 171 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 ILKQ13418 452 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 KCNC3Q14003 757 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 ANXA8L1Q5VT79 327 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 ZNF57Q68EA5 555 aaPredicted RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 GPR139Q6DWJ6 353 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 NCEH1Q6PIU2 408 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 BRAT1Q6PJG6 821 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 RSPO2Q6UXX9 243 aaPredicted RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 GPALPP1Q8IXQ4 340 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 TCEANCQ8N8B7 351 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 OR52I1Q8NGK6 324 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 WACQ9BTA9 647 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 TMEM106CQ9BVX2 250 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 HCN2Q9UL51 889 aa16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 SF3B6Q9Y3B4 125 aaKnown RBP16.82■□□□□ 0.28
CDKN1B-201ENST00000228872 TRBV4-1A0A0J9YWV2 114 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 MTMR11A4FU01 709 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 H3BNC9 293 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 STK25O00506 426 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 JUPP14923 745 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 CSF2RAP15509 400 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 ITGALP20701 1170 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 RPS24P62847 133 aaKnown RBP16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 RING1Q06587 406 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms