RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 C6P13671 934 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 HSD3B1P14060 373 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 CD40LGP29965 261 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 POU3F4P49335 361 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 RHDQ02161 417 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 GNMTQ14749 295 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 UGT8Q16880 541 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 CATSPEREQ5SY80 951 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 C1orf74Q96LT6 269 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 PEBP4Q96S96 227 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 PKP2Q99959 881 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 PELOQ9BRX2 385 aaKnown RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 DPH7Q9BTV6 452 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 RPF2Q9H7B2 306 aaKnown RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF442Q9H7R0 627 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 MOV10Q9HCE1 1003 aaKnown RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 SH3BGRL2Q9UJC5 107 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 KLHL21Q9UJP4 597 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 AK4P27144 223 aaPredicted RBP12.69□□□□□ -0.38
COL1A1-201ENST00000225964 SLC18A2Q05940 514 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 NSDHLQ15738 373 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 KIAA1614Q5VZ46 1190 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 RCBTB1Q8NDN9 531 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 SEC14L1Q92503 715 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 THRSPQ92748 146 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 NECTIN4Q96NY8 510 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 GPR62Q9BZJ7 368 aa12.69□□□□□ -0.38
COL1A1-201ENST00000225964 BEST1O76090 585 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 C8BP07358 591 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 GNAO1P09471 354 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 THEGLP0DJG4 465 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 RAC2P15153 192 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 CD72P21854 359 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 CDH15P55291 814 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 ARG2P78540 354 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 CRYZQ08257 329 aaKnown RBP12.68□□□□□ -0.38
COL1A1-201ENST00000225964 CDNFQ49AH0 187 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 HSD17B12Q53GQ0 312 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 KIAA0319Q5VV43 1072 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 ZDHHC24Q6UX98 284 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 PLEKHG7Q6ZR37 379 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 TMEM139Q8IV31 216 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 OR4N5Q8IXE1 308 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 OR52P1PQ8NH57 321 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 RXFP3Q9NSD7 469 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 C1orf226A1L170 272 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 LRRN3E7EW58 273 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 APBB3O95704 486 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 ENDOUP21128 410 aaKnown RBP12.68□□□□□ -0.38
COL1A1-201ENST00000225964 RIDAP52758 137 aaKnown RBP12.68□□□□□ -0.38
COL1A1-201ENST00000225964 GINS1Q14691 196 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 BCL2L15Q5TBC7 163 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF431Q8TF32 576 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-201ENST00000225964 LRRN3Q9H3W5 708 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 UNCXA6NJT0 531 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 B8ZZF3 427 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 C5AR1P21730 350 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 VIPR2P41587 438 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 CAV3P56539 151 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 EEF1A1P5Q5VTE0 462 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF517Q6ZMY9 492 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-201ENST00000225964 OR2T33Q8NG76 320 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 MFSD8Q8NHS3 518 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 SUN5Q8TC36 379 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 FRS2Q8WU20 508 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 TM9SF4Q92544 642 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 F2RL3Q96RI0 385 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 CPEB1Q9BZB8 566 aaKnown RBP12.68□□□□□ -0.38
COL1A1-201ENST00000225964 KCNIP1Q9NZI2 227 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 GJE1A6NN92 205 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 THBS2P35442 1172 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 COL9A3Q14050 684 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-201ENST00000225964 CNPY1Q3B7I2 92 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 ABHD17BQ5VST6 288 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 FTMTQ8N4E7 242 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 PSD4Q8NDX1 1056 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 IGSF8Q969P0 613 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 POPDC3Q9HBV1 291 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 ACTR3BQ9P1U1 418 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 PIRO00625 290 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 LATO43561 262 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 HBQ1P09105 142 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 FOLR3P41439 243 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 AFF1P51825 1210 aaKnown RBP12.68□□□□□ -0.38
COL1A1-201ENST00000225964 SHC2P98077 582 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 RSU1Q15404 277 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 DTX3Q8N9I9 347 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 OR51A7Q8NH64 312 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 TRIB2Q92519 343 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 HINT2Q9BX68 163 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 CDH20Q9HBT6 801 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 ABCG2Q9UNQ0 655 aa12.68□□□□□ -0.38
COL1A1-201ENST00000225964 SLC19A2O60779 497 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 PET100P0DJ07 73 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 DEFB110Q30KQ9 67 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 DCDC5Q6ZRR9 648 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 RPLP0P6Q8NHW5 317 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 KATNBL1Q9H079 304 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms