RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 MAN2A2P49641 1150 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 DSTNP60981 165 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 SNRPD2P62316 118 aaKnown RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 PIN1Q13526 163 aaPredicted RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 SYTL3Q4VX76 610 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 PYDC2Q56P42 97 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 TMEM201Q5SNT2 666 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 MFSD4BQ5TF39 518 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 ACSM5Q6NUN0 579 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 PDZD3Q86UT5 571 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 NPAS4Q8IUM7 802 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 VWA5B2Q8N398 1253 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 YIPF7Q8N8F6 280 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 ZFP41Q8N8Y5 198 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 OR52I1Q8NGK6 324 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 FIBINQ8TAL6 211 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 JPH3Q8WXH2 748 aaPredicted RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 METTL2AQ96IZ6 378 aaKnown RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 MSLNLQ96KJ4 702 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 LMLNQ96KR4 655 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 KATNB1Q9BVA0 655 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 POLR2J3Q9H1A7 115 aaKnown RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 ELAC1Q9H777 363 aaKnown RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 RNF121Q9H920 327 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 DMRT3Q9NQL9 472 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 ACOXLQ9NUZ1 547 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 SPIN1Q9Y657 262 aaPredicted RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 KCNE2Q9Y6J6 123 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 PRRG1O14668 218 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 ADAP00813 363 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 ALPPP05187 535 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 TSPAN19P0C672 248 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 ALDH9A1P49189 494 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 MLLT11Q13015 90 aaPredicted RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 TARDBPQ13148 414 aaKnown RBP eCLIP11.78□□□□□ -0.52
NUP88-201ENST00000225696 ELOAQ14241 798 aaKnown RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 INSL4Q14641 139 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 P2RY14Q15391 338 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 REEP3Q6NUK4 255 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 ERAP2Q6P179 960 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 SYCE2Q6PIF2 218 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 GAREM2Q75VX8 874 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 SHFQ7M4L6 423 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 PROKR2Q8NFJ6 384 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 OR52P1PQ8NH57 321 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 BTN2A2Q8WVV5 523 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 TMEM159Q96B96 161 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 TMEM169Q96HH4 297 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 TMEM19Q96HH6 336 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 FRMD6Q96NE9 622 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 RACGAP1Q9H0H5 632 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 B3GAT2Q9NPZ5 323 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 RPRD1BQ9NQG5 326 aaKnown RBP11.78□□□□□ -0.52
NUP88-201ENST00000225696 NDOR1Q9UHB4 597 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 ANGPT4Q9Y264 503 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 CLCA3PQ9Y6N3 262 aa11.78□□□□□ -0.52
NUP88-201ENST00000225696 SLC5A10A0PJK1 596 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 PIPSLA2A3N6 862 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 ARRDC5A6NEK1 342 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 RTCAO00442 366 aaKnown RBP11.77□□□□□ -0.53
NUP88-201ENST00000225696 POLR1CO15160 346 aaPredicted RBP11.77□□□□□ -0.53
NUP88-201ENST00000225696 NCR1O76036 304 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 NTN1O95631 604 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 CKMP06732 381 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 YES1P07947 543 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 OR12D1P0DN82 309 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
NUP88-201ENST00000225696 IRS1P35568 1242 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 GAS1P54826 345 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 COL9A2Q14055 689 aaPredicted RBP11.77□□□□□ -0.53
NUP88-201ENST00000225696 NFE2L1Q14494 772 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 HEPACAMQ14CZ8 416 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 SMUG1Q53HV7 270 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 SYT14P1Q58G82 188 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 DCST1Q5T197 706 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 PDZK1Q5T2W1 519 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 XKRXQ6PP77 449 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 CASP12Q6UXS9 341 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 GDPGP1Q6ZNW5 385 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 ZNF557Q8N988 423 aaPredicted RBP11.77□□□□□ -0.53
NUP88-201ENST00000225696 GATAD2BQ8WXI9 593 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 UCN3Q969E3 161 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 CXorf40BQ96DE9 158 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 ZBED6CLQ96FA7 236 aaPredicted RBP11.77□□□□□ -0.53
NUP88-201ENST00000225696 OTUB1Q96FW1 271 aaPredicted RBP11.77□□□□□ -0.53
NUP88-201ENST00000225696 PDXPQ96GD0 296 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 DHRS1Q96LJ7 313 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 IRF2BPLQ9H1B7 796 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 CTPS2Q9NRF8 586 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 TOR4AQ9NXH8 423 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 RPL36Q9Y3U8 105 aaKnown RBP11.77□□□□□ -0.53
NUP88-201ENST00000225696 BACE2Q9Y5Z0 518 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 PRAMEF27A3QJZ7 478 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 ANKDD1BA6NHY2 528 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 MYL12BO14950 172 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 SEC14L5O43304 696 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 LATS1O95835 1130 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 OLFM2O95897 454 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 ALDH1A1P00352 501 aa11.77□□□□□ -0.53
NUP88-201ENST00000225696 IFNA14P01570 189 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms