RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 HOXD8P13378 290 aaPredicted RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 ITGB8P26012 769 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 TXNL4AP83876 142 aaKnown RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 PIGFQ07326 219 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 SERINC2Q96SA4 455 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 ANKRD10Q9NXR5 420 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 FAM159BA6NKW6 160 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 KLKB1P03952 638 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 TPOP07202 933 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 CDKN2DP55273 166 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 GABREP78334 506 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 BNIP1Q12981 228 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 HLA-BQ31612 363 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 RAB41Q5JT25 222 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 CCSAPQ6IQ19 270 aaPredicted RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 DHRS13Q6UX07 377 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 ESX1Q8N693 406 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 AGPAT4Q9NRZ5 378 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 COMMD9Q9P000 198 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 RIMKLBQ9ULI2 386 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 LOXL2Q9Y4K0 774 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 SOBPA7XYQ1 873 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 PRRT4C9JH25 899 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 VILLO15195 856 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 ADAMDEC1O15204 470 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 C1SP09871 688 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 G6PDP11413 515 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 PTGER1P34995 402 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 AP2S1P53680 142 aaPredicted RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 CLDN10P78369 228 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 CDK6Q00534 326 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 TIMM50Q3ZCQ8 353 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 MZT2BQ6NZ67 158 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 HSDL2Q6YN16 418 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 PDPRQ8NCN5 879 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 TOR1AIP2Q8NFQ8 470 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 TCTN2Q96GX1 697 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 BARD1Q99728 777 aaKnown RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 LIN28AQ9H9Z2 209 aaKnown RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 ATP13A2Q9NQ11 1180 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 GJE1A6NN92 205 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 J3QRK9 145 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ZNF3P17036 446 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 PSMB5P28074 263 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 RGS21Q2M5E4 152 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 PDCD4Q53EL6 469 aaKnown RBP13.11□□□□□ -0.31
SIX4-201ENST00000216513 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 INSM2Q96T92 566 aaPredicted RBP13.11□□□□□ -0.31
SIX4-201ENST00000216513 UCKL1Q9NWZ5 548 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 TRNAU1APQ9NX07 287 aaKnown RBP13.11□□□□□ -0.31
SIX4-201ENST00000216513 HS3ST3A1Q9Y663 406 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ZNF487B1APH4 448 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
SIX4-201ENST00000216513 LDB3O75112 727 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 MT-ND5P03915 603 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 CCR2P41597 374 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ZXDBP98169 803 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 SIGLEC14Q08ET2 396 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 SERTAD2Q14140 314 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 WSCD2Q2TBF2 565 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ZDHHC21Q8IVQ6 265 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 GALNT15Q8N3T1 639 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 C19orf47Q8N9M1 422 aaKnown RBP13.11□□□□□ -0.31
SIX4-201ENST00000216513 MFSD2AQ8NA29 543 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 OR56A3Q8NH54 315 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 TM9SF3Q9HD45 589 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 PNPLA3Q9NST1 481 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 PCDHGA3Q9Y5H0 932 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 RNF215Q9Y6U7 377 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ISPDA4D126 451 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 GPR89AB7ZAQ6 455 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 G3V3Y1 287 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 GPR89BP0CG08 455 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ICAM2P13598 275 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 SLC5A2P31639 672 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 BMP8BP34820 402 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 RGRP47804 291 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 CHRNEQ04844 493 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 OR9A4Q8NGU2 314 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ABHD5Q8WTS1 349 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 BIRC7Q96CA5 298 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 TRBC2A0A5B9 178 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 HMGA1P17096 107 aaKnown RBP13.11□□□□□ -0.31
SIX4-201ENST00000216513 IL12AP29459 219 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 HSD11B2P80365 405 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 SCN1BQ07699 218 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 CYP1B1Q16678 543 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ZNF550Q7Z398 422 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 STX16O14662 325 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 EMC8O43402 210 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 PRAMEF2O60811 474 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 CLCN2P51788 898 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 KCNC4Q03721 635 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 EEF1A1P5Q5VTE0 462 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 HMBOX1Q6NT76 420 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ZC3H3Q8IXZ2 948 aaKnown RBP13.11□□□□□ -0.31
SIX4-201ENST00000216513 PDXPQ96GD0 296 aa13.11□□□□□ -0.31
SIX4-201ENST00000216513 ZDHHC18Q9NUE0 388 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms