RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 RACGAP1Q9H0H5 632 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 PLSCR3Q9NRY6 295 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 OSGIN1Q9UJX0 560 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 ITGB1BP2Q9UKP3 347 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 ANGPT4Q9Y264 503 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 VPS13AQ96RL7 3174 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 FAM183AA6NL82 134 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 IDH3BO43837 385 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 PRMT3O60678 531 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 SEMA7AO75326 666 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 CTNNB1P35222 781 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 SSR2P43308 183 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 BCL2A1Q16548 175 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 SPIN4Q56A73 249 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 ZNF805Q5CZA5 627 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 ZC3H12BQ5HYM0 836 aaKnown RBP14.33□□□□□ -0.12
EFNB1-201ENST00000204961 ZNF614Q8N883 585 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 OR8K5Q8NH50 307 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 DNAJA3Q96EY1 480 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 SLC6A17Q9H1V8 727 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 POFUT2Q9Y2G5 429 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 RTTNQ86VV8 2226 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 AGAP14A8MT82 685 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 PLPP1O14494 284 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 MYL12BO14950 172 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 PSIP1O75475 530 aaKnown RBP14.33□□□□□ -0.12
EFNB1-201ENST00000204961 MPC1LP0DKB6 136 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 ANXA8P13928 327 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 IFITM2Q01629 132 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 HNRNPA0Q13151 305 aaKnown RBP14.33□□□□□ -0.12
EFNB1-201ENST00000204961 LRIT3Q3SXY7 679 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 SLC35F1Q5T1Q4 408 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 ZNF547Q8IVP9 402 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 CRIPAKQ8N1N5 446 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 BBS10Q8TAM1 723 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 DIRAS2Q96HU8 199 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 PAWRQ96IZ0 340 aaKnown RBP14.33□□□□□ -0.12
EFNB1-201ENST00000204961 FERD3LQ96RJ6 166 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 BBS4Q96RK4 519 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 TSSK6Q9BXA6 273 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 HDHD5Q9BXW7 423 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 IRAK3Q9Y616 596 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 CLCA3PQ9Y6N3 262 aa14.33□□□□□ -0.12
EFNB1-201ENST00000204961 SNRNP200O75643 2136 aaKnown RBP14.32□□□□□ -0.12
EFNB1-201ENST00000204961 HELZP42694 1942 aaKnown RBP14.32□□□□□ -0.12
EFNB1-201ENST00000204961 NPC1O15118 1278 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 LCMT2O60294 686 aaKnown RBP14.32□□□□□ -0.12
EFNB1-201ENST00000204961 TNFRSF21O75509 655 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 PCGF2P35227 344 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 OR2B6P58173 313 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 BAK1Q16611 211 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 FCRLBQ6BAA4 426 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 C17orf64Q86WR6 236 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 OR52N2Q8NGI0 321 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 SLC7A13Q8TCU3 470 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 IPCEF1Q8WWN9 437 aaPredicted RBP14.32□□□□□ -0.12
EFNB1-201ENST00000204961 CTRCQ99895 268 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 TMED9Q9BVK6 235 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 UGT2A1Q9Y4X1 527 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 A0A1W2PPK0 400 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 IGLON5A6NGN9 336 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 TRIM64BA6NI03 449 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 H3BSH0 61 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 KMOO15229 486 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 GPR37L1O60883 481 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 TSC22D2O75157 780 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 ADH1AP07327 375 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 PEPDP12955 493 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 CEBPBP17676 345 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 FUT1P19526 365 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 PSMA3P25788 255 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
EFNB1-201ENST00000204961 CCT3P49368 545 aaKnown RBP14.32□□□□□ -0.12
EFNB1-201ENST00000204961 PNLIPRP1P54315 467 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 VEZF1Q14119 521 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 GINS1Q14691 196 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 TEAD4Q15561 434 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 SSX1Q16384 188 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 NXPE4Q6UWF7 544 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 PAMR1Q6UXH9 720 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 RRM2BQ7LG56 351 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 ADGRF3Q8IZF5 1079 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 SLC43A3Q8NBI5 491 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 SIMC1Q8NDZ2 872 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 ARRDC3Q96B67 414 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 NUS1Q96E22 293 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 ZNF486Q96H40 463 aaPredicted RBP14.32□□□□□ -0.12
EFNB1-201ENST00000204961 CNDP2Q96KP4 475 aaKnown RBP14.32□□□□□ -0.12
EFNB1-201ENST00000204961 LRR1Q96L50 414 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 KLHL31Q9H511 634 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 ASIC5Q9NY37 505 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 STOML2Q9UJZ1 356 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 KCNE3Q9Y6H6 103 aa14.32□□□□□ -0.12
EFNB1-201ENST00000204961 C2orf92A0A1B0GVN3 265 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 SLC5A10A0PJK1 596 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 ZNF860A6NHJ4 632 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 H0YIV9 168 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 GNB5O14775 395 aa14.31□□□□□ -0.12
EFNB1-201ENST00000204961 TMPRSS11DO60235 418 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms