RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Cldn2O88552 230 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Abcb1aP21447 1276 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Sox4Q06831 440 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Arhgef15Q5FWH6 849 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Hsd3b5Q61694 373 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 HjurpQ6PG16 667 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 PigzQ8BTP0 560 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Timd2Q8R183 305 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Slc25a46Q9CQS4 418 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Cldn34b2Q9D9N2 209 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 SktA2AQ25 1946 aaKnown RBP12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Gm42688A0A0R3P9D1 673 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Vmn2r106E9PY92 862 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Capns1O88456 269 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Rpl6P47911 296 aaKnown RBP12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Flt3lgP49772 232 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Fubp3Q3TIX6 575 aaKnown RBP12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Dennd1bQ3U1T9 766 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Il1rapQ61730 570 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Olfr1318Q7TQW6 320 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Csnk1g1Q8BTH8 459 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Nt5dc1Q8C5P5 467 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ccdc142Q8CAI1 738 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Slc31a1Q8K211 196 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Olfr1317Q8VF84 316 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Olfr683Q8VGV1 319 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Elp2Q91WG4 831 aaKnown RBP12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Zfp810Q99K45 461 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ifitm3Q9CQW9 137 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Dhrs7Q9CXR1 338 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Exosc7Q9D0M0 291 aaKnown RBP12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Cst11Q9D269 139 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Fam122cQ9D5J5 180 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ppil3Q9D6L8 161 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Pmepa1Q9D7R2 260 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Aif1lQ9EQX4 150 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Jph3Q9ET77 744 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Cdc20Q9JJ66 499 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Xpr1Q9Z0U0 695 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Gm33543A0A1B0GSI5 81 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Olfr640E9Q7P5 314 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Nckap1P28660 1128 aaKnown RBP12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Plin2P43883 425 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 CenpcP49452 906 aaKnown RBP12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 GcgP55095 180 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 KapP61110 121 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Opa3Q505D7 179 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Lag3Q61790 521 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Il20raQ6PHB0 546 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ppp2r2bQ6ZWR4 443 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Kctd7Q8BJK1 289 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ttc23Q8CHY7 488 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Galnt18Q8K1B9 622 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Cops8Q8VBV7 209 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Olfr441Q8VFS5 310 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Imp3Q921Y2 184 aaKnown RBP12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Adgrl4Q923X1 739 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Klhl22Q99JN2 634 aa12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 PpieQ9QZH3 301 aaKnown RBP12.22□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Pde4dipQ80YT7 2224 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 FpgtG5E8F4 590 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Efna3O08545 230 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Cdk5r2O35926 369 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Cacng1O70578 223 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Cd160O88875 185 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Tk1P04184 233 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Mrpl10Q3TBW2 262 aaKnown RBP12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Foxr1Q3UTB7 268 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Pydc3Q3V3Q4 588 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ggt1Q60928 568 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Alg8Q6P8H8 526 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Kif18bQ6PFD6 834 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Slc6a7Q6PGE7 637 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Tas2r3Q7TQA7 316 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Olfr384Q7TRX8 312 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 PdprQ7TSQ8 878 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Clba1Q8BHN9 321 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Vmn1r215Q8R264 300 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Vmn1r234Q8R298 329 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ncbp2Q9CQ49 156 aaKnown RBP12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 MINDY3Q9CV28 444 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 PigkQ9CXY9 395 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Nudt14Q9D142 222 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Spata19Q9DAQ9 154 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Gm21904A8HG57 180 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 C6E9Q6D8 931 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Gm21866J3QMH4 180 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Matn4O89029 624 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Camk2bP28652 542 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Chrm4P32211 479 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 PvalbP32848 110 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Map2k4P47809 397 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Gjb5Q02739 271 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Mtmr11Q3V1L6 700 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Slc26a10Q5EBI0 492 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 WdcpQ6NV72 663 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Zfp184Q7TSH9 737 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Nedd4lQ8CFI0 1004 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Zfp709Q8VC29 727 aa12.21□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Oas1hQ8VI97 369 aa12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms