RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 LDB3O75112 727 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 IGHEP01854 428 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 IL6P05231 212 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 HEXBP07686 556 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 ATXN8OSP0DMR3 200 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 COX7A2P14406 83 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 PTPN4P29074 926 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 DLSTP36957 453 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 ZFP36L2P47974 494 aaKnown RBP11.57□□□□□ -0.56
LINC00339-213ENST00000642137 XKP51811 444 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 POLR2JP52435 117 aaKnown RBP11.57□□□□□ -0.56
LINC00339-213ENST00000642137 NME5P56597 212 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 IGLV3-21P80748 117 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-213ENST00000642137 RHAGQ02094 409 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 KLF10Q13118 480 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 SLC13A2Q13183 592 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 DNASE1L3Q13609 305 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 SERTAD2Q14140 314 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 SSPNQ14714 243 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 CEBPEQ15744 281 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 PRSS53Q2L4Q9 553 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 AGKQ53H12 422 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 BLOC1S3Q6QNY0 202 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 ERMP1Q7Z2K6 904 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 FUNDC1Q8IVP5 155 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 MMP21Q8N119 569 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 ENDOVQ8N8Q3 282 aaKnown RBP11.57□□□□□ -0.56
LINC00339-213ENST00000642137 OR7A2PQ8NGA2 310 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 OR8J2Q8NGG1 315 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 OR2Y1Q8NGV0 311 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 TSPEARQ8WU66 669 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 NACC2Q96BF6 587 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 LRRC37BQ96QE4 947 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 DUSP26Q9BV47 211 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 CCDC106Q9BWC9 280 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 ALOXE3Q9BYJ1 711 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 BHLHE41Q9C0J9 482 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-213ENST00000642137 VN1R1Q9GZP7 353 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 SOX17Q9H6I2 414 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-213ENST00000642137 SLC35C2Q9NQQ7 365 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 CCDC167Q9P0B6 97 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 CROTQ9UKG9 612 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 UTS2RQ9UKP6 389 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 ANGPTL2Q9UKU9 493 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 TCFL5Q9UL49 500 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 MKL2Q9ULH7 1088 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 PTRH2Q9Y3E5 179 aaKnown RBP11.57□□□□□ -0.56
LINC00339-213ENST00000642137 CLDN16Q9Y5I7 305 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 ZNF780BQ9Y6R6 833 aa11.57□□□□□ -0.56
LINC00339-213ENST00000642137 IGKV3D-11A0A0A0MRZ8 115 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 MYO1GB0I1T2 1018 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 IDSB3KWA1 339 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 FGF17O60258 216 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 ALOX12BO75342 701 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 ERAL1O75616 437 aaKnown RBP11.56□□□□□ -0.56
LINC00339-213ENST00000642137 CDC123O75794 336 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-213ENST00000642137 SLC35E2P0CK97 266 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 LAMP1P11279 417 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 PORP16435 677 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-213ENST00000642137 CSNK2A2P19784 350 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-213ENST00000642137 S100A3P33764 101 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 GALNSP34059 522 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 FOLR3P41439 243 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 FRKP42685 505 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-213ENST00000642137 PCBP4P57723 403 aaKnown RBP11.56□□□□□ -0.56
LINC00339-213ENST00000642137 FOLH1Q04609 750 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 STX4Q12846 297 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 PGS1Q32NB8 556 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 MINDY4Q4G0A6 757 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 ZNF385BQ569K4 471 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 MFSD4BQ5TF39 518 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 ANXA8L1Q5VT79 327 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 TMEM205Q6UW68 189 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 OR4N5Q8IXE1 308 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 PRSS58Q8IYP2 241 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 VPS37AQ8NEZ2 397 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 OR9I1Q8NGQ6 314 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 NUDT8Q8WV74 236 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 EXOSC8Q96B26 276 aaKnown RBP11.56□□□□□ -0.56
LINC00339-213ENST00000642137 KLHL29Q96CT2 875 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 CNRIP1Q96F85 164 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-213ENST00000642137 ZNF681Q96N22 645 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 RBCK1Q9BYM8 510 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 SLC52A3Q9NQ40 469 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 NECTIN3Q9NQS3 549 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 SEMA3GQ9NS98 782 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 GIMAP4Q9NUV9 329 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 C3orf18Q9UK00 162 aa11.56□□□□□ -0.56
LINC00339-213ENST00000642137 SPEGQ15772 3267 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 PRSS51A0A1B0GVH4 220 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 TCRBV16S1A1N1A0A5B0 115 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 OR2W5A6NFC9 320 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 CFLARO15519 480 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 SCN2BO60939 215 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 PGRP06401 933 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 UMODP07911 640 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 CPMP14384 443 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 F8A1P23610 371 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 MPIP34949 423 aa11.55□□□□□ -0.56
LINC00339-213ENST00000642137 KIR3DL1P43629 444 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms