RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 GBP5Q96PP8 586 aa18.68■□□□□ 0.58
PHGDH-210ENST00000641115 SPAG4Q9NPE6 437 aa18.68■□□□□ 0.58
PHGDH-210ENST00000641115 ACSS1Q9NUB1 689 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-210ENST00000641115 SLAMF8Q9P0V8 285 aa18.68■□□□□ 0.58
PHGDH-210ENST00000641115 TRPC4Q9UBN4 977 aa18.68■□□□□ 0.58
PHGDH-210ENST00000641115 PCDHGA7Q9Y5G6 932 aa18.68■□□□□ 0.58
PHGDH-210ENST00000641115 KIF26BQ2KJY2 2108 aa18.68■□□□□ 0.58
PHGDH-210ENST00000641115 CCDC187A0A096LP49 1063 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 C15orf38-AP3S2A0A0A6YYH1 394 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 WASHC1A8K0Z3 465 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 CLDN4O14493 209 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 C6orf47O95873 294 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 NTRK1P04629 796 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 ITIH1P19827 911 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 FRKP42685 505 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 CDKN2CP42773 168 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 HNRNPFP52597 415 aaKnown RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 MANFP55145 182 aaKnown RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 PCBP4P57723 403 aaKnown RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 PSME3P61289 254 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 NUP210LQ5VU65 1888 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 BNC2Q6ZN30 1099 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 ARPINQ7Z6K5 226 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 ZNF595Q8IYB9 648 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 ARHGAP24Q8N264 748 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 TMEM52Q8NDY8 209 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 CNRIP1Q96F85 164 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 OR1F2PQ96R84 312 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 CGREF1Q99674 301 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 PAIP1Q9H074 479 aaKnown RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 NEUROD4Q9HD90 331 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 SPEGQ15772 3267 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 FER1L5A0AVI2 2057 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 ANKRD65E5RJM6 399 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 TM4SF5O14894 197 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 GSC2O15499 205 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 FHP07954 510 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 ABCB1P08183 1280 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 CSNK2A2P19784 350 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 IL10P22301 178 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 MPIP34949 423 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 NOVA1P51513 510 aaKnown RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 MAPK10P53779 464 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 HBA1P69905 142 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 FOLH1Q04609 750 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 DCAF12Q5T6F0 453 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 C8orf82Q6P1X6 216 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 SHISA5Q8N114 240 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 TRIML2Q8N7C3 387 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 SLC38A9Q8NBW4 561 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 OR5P2Q8WZ92 322 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 RNF31Q96EP0 1072 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 THTPAQ9BU02 230 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 CADM1Q9BY67 442 aaKnown RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 SLAMF7Q9NQ25 335 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 TAS2R9Q9NYW1 312 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 VAPAQ9P0L0 249 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 PISDQ9UG56 409 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 CDV3Q9UKY7 258 aaKnown RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 PRPF19Q9UMS4 504 aaKnown RBP18.67■□□□□ 0.58
PHGDH-210ENST00000641115 VPS4AQ9UN37 437 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 PCDHB14Q9Y5E9 798 aa18.67■□□□□ 0.58
PHGDH-210ENST00000641115 MYO1GB0I1T2 1018 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 SLC30A4O14863 429 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 PLD2O14939 933 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 LDB3O75112 727 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 GSNP06396 782 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 C8orf89P0DMQ9 161 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 PGM1P36871 562 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 FEN1P39748 380 aaKnown RBP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 NCBP2P52298 156 aaKnown RBP eCLIP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 DCDP81605 110 aaKnown RBP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 HSPB3Q12988 150 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 SLC13A2Q13183 592 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 MLC1Q15049 377 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 CEBPEQ15744 281 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 ZNF621Q6ZSS3 439 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 LRRC25Q8N386 305 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 GOT1L1Q8NHS2 421 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 RAB3IPQ96QF0 476 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 GPATCH1Q9BRR8 931 aaKnown RBP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 ZPBPQ9BS86 351 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 ULBP3Q9BZM4 244 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 MMADHCQ9H3L0 296 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 MKKSQ9NPJ1 570 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 PRTFDC1Q9NRG1 225 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 ADA2Q9NZK5 511 aa18.66■□□□□ 0.58
PHGDH-210ENST00000641115 ZNF282Q9UDV7 671 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-210ENST00000641115 CFAP73A6NFT4 308 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 FGF17O60258 216 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 B4GALT2O60909 372 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 CDC123O75794 336 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-210ENST00000641115 GPR75O95800 540 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 ZCCHC18P0CG32 403 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 SLC6A2P23975 617 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 GPC1P35052 558 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 XKP51811 444 aa18.65■□□□□ 0.58
PHGDH-210ENST00000641115 NKAIN1Q4KMZ8 207 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms