RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PLATP00750 562 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 ATXN1LP0C7T5 689 aaKnown RBP11.46□□□□□ -0.57
CAPN3-221ENST00000638141 RHCEP18577 417 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 CCR1P32246 355 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 HSD17B2P37059 387 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 BACE1P56817 501 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 HTRA3P83110 453 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 TPBGQ13641 420 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 PTGES3Q15185 160 aaKnown RBP11.46□□□□□ -0.57
CAPN3-221ENST00000638141 LIPKQ5VXJ0 399 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 AFTPHQ6ULP2 937 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 PAQR9Q6ZVX9 377 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 LGI4Q8N135 537 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 RTL3Q8N8U3 475 aaKnown RBP11.46□□□□□ -0.57
CAPN3-221ENST00000638141 ACOT12Q8WYK0 555 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 NELL1Q92832 810 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 KLRG1Q96E93 195 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 LCORQ96JN0 433 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-221ENST00000638141 SLC38A3Q99624 504 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 RNF32Q9H0A6 362 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 AGO3Q9H9G7 860 aaKnown RBP11.46□□□□□ -0.57
CAPN3-221ENST00000638141 LRTM1Q9HBL6 345 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 COMMD3Q9UBI1 195 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 REV1Q9UBZ9 1251 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 TRPS1Q9UHF7 1281 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 CLEC2DQ9UHP7 191 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 SF3B6Q9Y3B4 125 aaKnown RBP11.46□□□□□ -0.57
CAPN3-221ENST00000638141 RPL36Q9Y3U8 105 aaKnown RBP11.46□□□□□ -0.57
CAPN3-221ENST00000638141 SNX10Q9Y5X0 201 aa11.46□□□□□ -0.57
CAPN3-221ENST00000638141 OR51F1A6NGY5 319 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 D6RAR5 112 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 SMAD6O43541 496 aaKnown RBP11.46□□□□□ -0.58
CAPN3-221ENST00000638141 RASGRP1O95267 797 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 IGLV3-25P01717 112 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 IL2P60568 153 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 GTF2H2Q13888 395 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 PDE12Q6L8Q7 609 aaKnown RBP11.46□□□□□ -0.58
CAPN3-221ENST00000638141 GTF2H2CQ6P1K8 395 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 MSANTD2Q6P1R3 559 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 SUSD1Q6UWL2 747 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 ALKAL1Q6UXT8 129 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 TSEN54Q7Z6J9 526 aaKnown RBP11.46□□□□□ -0.58
CAPN3-221ENST00000638141 ZER1Q7Z7L7 766 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 SYNPOQ8N3V7 929 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 TEX26Q8N6G2 289 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 KRTCAP2Q8N6L1 136 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 TM9SF4Q92544 642 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 RFT1Q96AA3 541 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 MRPS24Q96EL2 167 aaKnown RBP11.46□□□□□ -0.58
CAPN3-221ENST00000638141 FCRL1Q96LA6 429 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 NIPSNAP1Q9BPW8 284 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 DOHHQ9BU89 302 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 ACTR6Q9GZN1 396 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 PDGFCQ9NRA1 345 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 TMEM184CQ9NVA4 438 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 DPP7Q9UHL4 492 aa11.46□□□□□ -0.58
CAPN3-221ENST00000638141 DSPPQ9NZW4 1301 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 TMEM88BA6NKF7 163 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 FAM74A7A6NL05 159 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 SUV39H1O43463 412 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 EIF1BO60739 113 aaKnown RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 CBX7O95931 251 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PEX11BO96011 259 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 S100A8P05109 93 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 MMP2P08253 660 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 EIF1P41567 113 aaKnown RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 CD86P42081 329 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 AFF1P51825 1210 aaKnown RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 ARHGDIBP52566 201 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 RPL6Q02878 288 aaKnown RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 LRRC32Q14392 662 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 ZNF528Q3MIS6 628 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 FAM74A3Q4VXF1 159 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 FBXO48Q5FWF7 155 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 METTL11BQ5VVY1 283 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 NLRC3Q7RTR2 1065 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 KANSL1Q7Z3B3 1105 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PRICKLE2Q7Z3G6 844 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 MILR1Q7Z6M3 343 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 CMIPQ8IY22 773 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 DMBX1Q8NFW5 382 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 ZNF668Q96K58 619 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PPP1R16BQ96T49 567 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PKMYT1Q99640 499 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 INPP5KQ9BT40 448 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 MED10Q9BTT4 135 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 ABCG5Q9H222 651 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 GSN-AS1Q9NRJ2 163 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 THSD1Q9NS62 852 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 NUDT15Q9NV35 164 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 NDUFAF4Q9P032 175 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PCOLCE2Q9UKZ9 415 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PTCH2Q9Y6C5 1203 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 DENND4AQ7Z401 1863 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 TP53BP1Q12888 1972 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 A0A1B0GW55 424 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 TRDV1A0A1B0GX56 115 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PLSCR5A0PG75 271 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 TRABD2BA6NFA1 517 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 MOXD2PA6NHM9 499 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms