RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 MAN1A2O60476 641 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 NDUFS2O75306 463 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 PRKRAO75569 313 aaKnown RBP20.4■□□□□ 0.86
CLN6-224ENST00000638076 VIPP01282 170 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 IFNW1P05000 195 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 DRD2P14416 443 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 MAP2K4P45985 399 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 ABATP80404 500 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 LRRC32Q14392 662 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 ZNF605Q86T29 641 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 OR9Q2Q8NGE9 314 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 MS4A6EQ96DS6 147 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 OR2M4Q96R27 311 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 GLIPR2Q9H4G4 154 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 PSME2Q9UL46 239 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 POFUT2Q9Y2G5 429 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 GADD45GO95257 159 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 RHCEP18577 417 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 FOXD4Q12950 439 aaPredicted RBP20.39■□□□□ 0.86
CLN6-224ENST00000638076 PUM1Q14671 1186 aaKnown RBP eCLIP20.39■□□□□ 0.86
CLN6-224ENST00000638076 SLC9A5Q14940 896 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 SZRD1Q7Z422 152 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 OR8K5Q8NH50 307 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 PSMA8Q8TAA3 256 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 TBC1D29Q9UFV1 150 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 RNF6Q9Y252 685 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 CA5BQ9Y2D0 317 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 KLHL20Q9Y2M5 609 aa20.39■□□□□ 0.86
CLN6-224ENST00000638076 GLOD5A6NK44 160 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 MT-ND2P03891 347 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 KCNC4Q03721 635 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 SLAMF1Q13291 335 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 MLC1Q15049 377 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 ENPP7Q6UWV6 458 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 RORBQ92753 470 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 FAIM2Q9BWQ8 316 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 CD93Q9NPY3 652 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 RHCGQ9UBD6 479 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 PCDHGA2Q9Y5H1 932 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 HEBP2Q9Y5Z4 205 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 COLEC10Q9Y6Z7 277 aa20.39■□□□□ 0.85
CLN6-224ENST00000638076 RGS10O43665 173 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 NR4A1P22736 598 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 GPC1P35052 558 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 GGT2P36268 569 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 LIMS1P48059 325 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 ENTPD1P49961 510 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 HMGA2P52926 109 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 EMP3P54852 163 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 BNIP3Q12983 259 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 MAPK11Q15759 364 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 ADPRMQ3LIE5 342 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 PHF10Q8WUB8 498 aaKnown RBP20.38■□□□□ 0.85
CLN6-224ENST00000638076 AMDHD1Q96NU7 426 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 SERHL2Q9H4I8 314 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 KIR3DX1Q9H7L2 352 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 SLC35C2Q9NQQ7 365 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 EHD3Q9NZN3 535 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 SCML1Q9UN30 329 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 F5P12259 2224 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 H0Y8X5 98 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 MFN2O95140 757 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 EML2O95834 649 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 HIST1H1TP22492 207 aaPredicted RBP20.38■□□□□ 0.85
CLN6-224ENST00000638076 AK4P27144 223 aaPredicted RBP20.38■□□□□ 0.85
CLN6-224ENST00000638076 AHRP35869 848 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 HTR4Q13639 388 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 C11orf91Q3C1V1 193 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 ABHD17CQ6PCB6 329 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 CCDC81Q6ZN84 652 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 SLC16A12Q6ZSM3 486 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 RD3Q7Z3Z2 195 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 P3H2Q8IVL5 708 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 FAM81AQ8TBF8 368 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 APOBEC4Q8WW27 367 aaKnown RBP20.38■□□□□ 0.85
CLN6-224ENST00000638076 OR1E3Q8WZA6 343 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 SYNPO2LQ9H987 977 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 ZNF556Q9HAH1 456 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 CCNB1IP1Q9NPC3 277 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 PRDM7Q9NQW5 492 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 ENPP5Q9UJA9 477 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 NCKAP1Q9Y2A7 1128 aa20.38■□□□□ 0.85
CLN6-224ENST00000638076 A8MVJ9 347 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 ISM1B1AKI9 464 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 MAN2B1O00754 1011 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 FADS2O95864 444 aaKnown RBP20.37■□□□□ 0.85
CLN6-224ENST00000638076 POU2F1P14859 743 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 CD72P21854 359 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 CMPK1P30085 196 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 MASP1P48740 699 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 PXNP49023 591 aaPredicted RBP20.37■□□□□ 0.85
CLN6-224ENST00000638076 NCBP2P52298 156 aaKnown RBP eCLIP20.37■□□□□ 0.85
CLN6-224ENST00000638076 LIM2P55344 173 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 TOR1AIP1Q5JTV8 583 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 ACOT4Q8N9L9 421 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 GPR32P1Q8NGA4 272 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 OR4E2Q8NGC2 313 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 TBC1D15Q8TC07 691 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 TANKQ92844 425 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 RSPO3Q9BXY4 272 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms