RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ACAD8Q9UKU7 415 aa18.64■□□□□ 0.58
CACNA1A-257ENST00000638009 UBBP0CG47 229 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 UBCP0CG48 685 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 ENGP17813 658 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 NRROSQ86YC3 692 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 PRRT1Q99946 306 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 ABCG5Q9H222 651 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 MAN2C1Q9NTJ4 1040 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 ABCB8Q9NUT2 735 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 TOXO94900 526 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 ALDOBP05062 364 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 GTF2BQ00403 316 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 CCINQ13939 588 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 COX15Q7KZN9 410 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 ZNF440Q8IYI8 595 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 C2orf15Q8WU43 125 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 FAM46BQ96A09 425 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 ZNF681Q96N22 645 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 ACO2Q99798 780 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 hCG_1807616A0A1W2PRN6 198 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 ADRB3P13945 408 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 IGFBP4P22692 258 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 IL10RBQ08334 325 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 CDK15Q96Q40 435 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 ERVK13-1Q9NX77 482 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 PRELID3BQ9Y3B1 194 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 SLC22A31A6NKX4 558 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 UBE2G2P60604 165 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 HAPLN3Q96S86 360 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 PCDHGA6Q9Y5G7 932 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 MYO16Q9Y6X6 1858 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 LRRC10BA6NIK2 292 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 MATN3O15232 486 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 KCNJ11Q14654 390 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 C9orf57Q5W0N0 161 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 CLEC10AQ8IUN9 316 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 NKD2Q969F2 451 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 TMBIM1Q969X1 311 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 REEP4Q9H6H4 257 aa18.64■□□□□ 0.57
CACNA1A-257ENST00000638009 IRAK2O43187 625 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 HBE1P02100 147 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 BRAT1Q6PJG6 821 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 CNN2Q99439 309 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 SERTAD3Q9UJW9 196 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 DIRAS1O95057 198 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 SCAPQ12770 1279 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 GK3PQ14409 553 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 RNASE10Q5GAN6 216 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 ANKRD54Q6NXT1 300 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 KCTD13Q8WZ19 329 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 ARMC5Q96C12 935 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 C2orf42Q9NWW7 574 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 TRBC2A0A5B9 178 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 GABRDO14764 452 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 BCHEP06276 602 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 CHRNA4P43681 627 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 TMPRSS12Q86WS5 348 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 COG8Q96MW5 612 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 IRS2Q9Y4H2 1338 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 A8MUI8 341 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 MMP8P22894 467 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 LSSP48449 732 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 SLC18B1Q6NT16 456 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 ANKS1BQ7Z6G8 1248 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 ZNF439Q8NDP4 499 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 NCDNQ9UBB6 729 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 TRIOBPQ9H2D6 2365 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 OR6C65A6NJZ3 312 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 FAM170BA6NMN3 283 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 RPL7AP62424 266 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 C16orf78Q8WTQ4 265 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 SLC2A11Q9BYW1 496 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 HPRP00739 348 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 TNFP01375 233 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 XRCC1P18887 633 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 CRYBB1P53674 252 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 ABHD18Q0P651 414 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 ZNF416Q9BWM5 594 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 SERTAD4Q9NUC0 356 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 GJD2Q9UKL4 321 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 LIPT1Q9Y234 373 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 RPS27AP62979 156 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 UBA52P62987 128 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 PRAMEF14Q5SWL7 426 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 FAM69AQ5T7M9 428 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 OR8K5Q8NH50 307 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 HSPE1-MOB4S4R3N1 261 aa18.63■□□□□ 0.57
CACNA1A-257ENST00000638009 FANCGO15287 622 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 DCNP07585 359 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 SBK2P0C263 348 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 NKX3-2P78367 333 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 HBG1P69891 147 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 HBG2P69892 147 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 OR6T1Q8NGN1 323 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 FNDC8Q8TC99 324 aa18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 SPRYD4Q8WW59 207 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 KIAA1143Q96AT1 154 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 RPF2Q9H7B2 306 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-257ENST00000638009 TLL1O43897 1013 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms