RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 OR1E3Q8WZA6 343 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 MUL1Q969V5 352 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 WDR34Q96EX3 536 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 FCRL1Q96LA6 429 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 C2orf42Q9NWW7 574 aa10.97□□□□□ -0.65
CLN6-217ENST00000636964 A0A096LPI6 279 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 TRBV5-3A0A0A0MS03 114 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 ERN1O75460 977 aaKnown RBP10.96□□□□□ -0.65
CLN6-217ENST00000636964 PRKCAP17252 672 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 AGXTP21549 392 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 CD40LGP29965 261 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 TIA1P31483 386 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLN6-217ENST00000636964 CASP9P55211 416 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 DAB2P98082 770 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 RELQ04864 619 aaPredicted RBP10.96□□□□□ -0.65
CLN6-217ENST00000636964 ZNF33BQ06732 778 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 SPIN4Q56A73 249 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 FAM129CQ86XR2 697 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 TMEM132CQ8N3T6 1108 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.96□□□□□ -0.65
CLN6-217ENST00000636964 OR4K1Q8NGD4 311 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 FAM120BQ96EK7 910 aaKnown RBP10.96□□□□□ -0.65
CLN6-217ENST00000636964 BMFQ96LC9 184 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 DUSP26Q9BV47 211 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 YTHDF1Q9BYJ9 559 aaKnown RBP10.96□□□□□ -0.65
CLN6-217ENST00000636964 MIR1-1HGQ9H1L0 117 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 KAT8Q9H7Z6 458 aaKnown RBP10.96□□□□□ -0.65
CLN6-217ENST00000636964 SDHAF3Q9NRP4 125 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 MALT1Q9UDY8 824 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 ANAPC2Q9UJX6 822 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 PNMA8BQ9ULN7 279 aaPredicted RBP10.96□□□□□ -0.65
CLN6-217ENST00000636964 FZD4Q9ULV1 537 aa10.96□□□□□ -0.65
CLN6-217ENST00000636964 TMEM238LA0A1B0GVL6 79 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 GPR89AB7ZAQ6 455 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 MBTPS2O43462 519 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 SCN2BO60939 215 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 SERPIND1P05546 499 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 GPR89BP0CG08 455 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 C7P10643 843 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 GGT1P19440 569 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 P2RX3P56373 397 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 SMAD4Q13485 552 aaKnown RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 CCINQ13939 588 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 SPATS1Q496A3 300 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 CPTPQ5TA50 214 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 ZNF551Q7Z340 670 aaPredicted RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 PROSER1Q86XN7 944 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 MMP21Q8N119 569 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 ZNF548Q8NEK5 533 aaPredicted RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 SMPDL3AQ92484 453 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 NCLNQ969V3 563 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 TIMM29Q9BSF4 260 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 FBRSQ9HAH7 460 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 FBXO8Q9NRD0 319 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 TBC1D29Q9UFV1 150 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 ADGRE2Q9UHX3 823 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 EXO1Q9UQ84 846 aaKnown RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 ELOVL7A1L3X0 281 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 ATP6V1G2-DDX39BF2Z307 99 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 SCAMP2O15127 329 aaKnown RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 TEAD1P28347 426 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 LSM3P62310 102 aaKnown RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 SRSF11Q05519 484 aaKnown RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 ZNF124Q15973 351 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 EOGTQ5NDL2 527 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 LRIF1Q5T3J3 769 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 PXDC1Q5TGL8 231 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 OR6Q1Q8NGQ2 317 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 F2RL3Q96RI0 385 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 USB1Q9BQ65 265 aaKnown RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 MACROD1Q9BQ69 325 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 CPPED1Q9BRF8 314 aaPredicted RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 MAGEL2Q9UJ55 1249 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 SCML1Q9UN30 329 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 MAN2B2Q9Y2E5 1009 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 RPH3AQ9Y2J0 694 aaPredicted RBP10.96□□□□□ -0.66
CLN6-217ENST00000636964 KLHL20Q9Y2M5 609 aa10.96□□□□□ -0.66
CLN6-217ENST00000636964 A0A0G2JN53 185 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 ANKDD1BA6NHY2 528 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 CENPBD1B2RD01 187 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 FOXE1O00358 373 aaPredicted RBP10.95□□□□□ -0.66
CLN6-217ENST00000636964 SCO2O43819 266 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 NTRK1P04629 796 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 ANXA6P08133 673 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 HSMCR30P0CW71 290 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 ERGP11308 486 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 CASP3P42574 277 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 CDC20Q12834 499 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 MTAPQ13126 283 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 DUOXA1Q1HG43 343 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 ZNF385BQ569K4 471 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 ENPP6Q6UWR7 440 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 USP30Q70CQ3 517 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 ARMC8Q8IUR7 673 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 KRT78Q8N1N4 520 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 OR52E1Q8NGJ3 308 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 CHID1Q9BWS9 393 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 TMEM168Q9H0V1 697 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 SPASTQ9UBP0 616 aa10.95□□□□□ -0.66
CLN6-217ENST00000636964 WARS2Q9UGM6 360 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms