RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 STPG1Q5TH74 334 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 EEF1A1P5Q5VTE0 462 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 TXNRD3NBQ6F5E7 133 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 TCEAL6Q6IPX3 200 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 KLC3Q6P597 504 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF449Q6P9G9 518 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ENPP7Q6UWV6 458 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 PLEKHM3Q6ZWE6 761 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 FJX1Q86VR8 437 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ZSCAN30Q86W11 494 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 COMMD2Q86X83 199 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM219AQ8IW50 185 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 KLHL7Q8IXQ5 586 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 EFCAB13Q8IY85 973 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 SYCP3Q8IZU3 236 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 GBGT1Q8N5D6 347 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ARL10Q8N8L6 244 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 L3MBTL4Q8NA19 623 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 OR7G3Q8NG95 312 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 OR5M8Q8NGP6 311 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 OLIG1Q8TAK6 271 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 MGARPQ8TDB4 240 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ELP5Q8TE02 316 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 HEXDCQ8WVB3 486 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 SSMEM1Q8WWF3 244 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 NSMAFQ92636 917 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 SEMA4DQ92854 862 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 DAZLQ92904 295 aaKnown RBP2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 TCEAL3Q969E4 200 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 PHF21AQ96BD5 680 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 DHX58Q96C10 678 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 SCMH1Q96GD3 660 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 TIPINQ9BVW5 301 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 CCDC94Q9BW85 323 aaPredicted RBP2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 SF3B5Q9BWJ5 86 aaKnown RBP2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 C8orf33Q9H7E9 229 aaPredicted RBP2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 LMAN1LQ9HAT1 526 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 CDH20Q9HBT6 801 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 PDRG1Q9NUG6 133 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 DDX19AQ9NUU7 478 aaKnown RBP2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC38A7Q9NVC3 462 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 GTSE1Q9NYZ3 720 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF224Q9NZL3 707 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 SEPT10Q9P0V9 454 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 GCNT4Q9P109 453 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 SIX4Q9UIU6 781 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 GMEB2Q9UKD1 530 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 RALYQ9UKM9 306 aaKnown RBP2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ANGPTL2Q9UKU9 493 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ITGA11Q9UKX5 1188 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 RNF150Q9ULK6 438 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 NDRG2Q9UN36 371 aaKnown RBP2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 CCL26Q9Y258 94 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 C2CD2Q9Y426 696 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ASB3Q9Y575 518 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 PCDHGB1Q9Y5G3 927 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ADAMTS9Q9P2N4 1935 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 MYO18AQ92614 2054 aaKnown RBP2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 MYOFQ9NZM1 2061 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 USP9XQ93008 2570 aaPredicted RBP2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 DCHS2Q6V1P9 2916 aa2.3□□□□□ -2.04
SMARCB1-208ENST00000634926 ITPR2Q14571 2701 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SPTA1P02549 2419 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TMEM131Q92545 1883 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PTPRJQ12913 1337 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 IGLV5-37A0A075B6J1 123 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 TEX13DA0A0J9YY54 714 aaPredicted RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 BCLAF3A2AJT9 711 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 HYKKA2RU49 373 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ARHGEF35A5YM69 484 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 C5orf60A6NFR6 353 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SDR42E2A6NKP2 422 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 E9PMD0 336 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 K7EQS6 105 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 K7ERI5 159 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 LAD1O00515 517 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PRRG1O14668 218 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 OGTO15294 1046 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 EIF3DO15371 548 aaKnown RBP eCLIP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC16A4O15374 487 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNHIT1O43257 154 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 AP5Z1O43299 807 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 WDR1O75083 606 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PGLSO95336 258 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 BAG4O95429 457 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ACSL3O95573 720 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 FGF19O95750 216 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 WDPCPO95876 746 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 OAS1P00973 400 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 MT-ND3P03897 115 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 RLN1P04808 185 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 PRSS2P07478 247 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CLTAP09496 248 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF23P17027 643 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 POLR2CP19387 275 aaPredicted RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 HLA-DPA1P20036 260 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 CSRP1P21291 193 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 BCKDHBP21953 392 aa2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 AZGP1P25311 298 aaKnown RBP2.29□□□□□ -2.04
SMARCB1-208ENST00000634926 GABRR2P28476 465 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms