RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 KDELR2P33947 212 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 HMGCLP35914 325 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 HERV-K104P61576 105 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 OR4D1Q15615 310 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 LRIF1Q5T3J3 769 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 KIAA0319Q5VV43 1072 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 C6orf120Q7Z4R8 191 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 OR52P1PQ8NH57 321 aa12.27□□□□□ -0.44
SCN8A-209ENST00000627620 DAZLQ92904 295 aaKnown RBP12.27□□□□□ -0.44
SCN8A-209ENST00000627620 APOBEC3BQ9UH17 382 aaKnown RBP12.27□□□□□ -0.44
SCN8A-209ENST00000627620 RNH1P13489 461 aaKnown RBP12.27□□□□□ -0.45
SCN8A-209ENST00000627620 MOGQ16653 247 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 SLC36A3Q495N2 470 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 GLT8D1Q68CQ7 371 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 EIF5AL1Q6IS14 154 aaKnown RBP12.27□□□□□ -0.45
SCN8A-209ENST00000627620 KCTD18Q6PI47 426 aaPredicted RBP12.27□□□□□ -0.45
SCN8A-209ENST00000627620 OR8S1Q8NH09 359 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 DPH2Q9BQC3 489 aaPredicted RBP12.27□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF700Q9H0M5 742 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 FZD3Q9NPG1 666 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 CCM2LQ9NUG4 571 aaPredicted RBP12.27□□□□□ -0.45
SCN8A-209ENST00000627620 SCP2D1Q9UJQ7 156 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 CKMT1AP12532 417 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 SRCP12931 536 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 MAGEA12P43365 314 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 RPS26P62854 115 aaKnown RBP12.27□□□□□ -0.45
SCN8A-209ENST00000627620 MAB21L1Q13394 359 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 CST6Q15828 149 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 SGCAQ16586 387 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 RUNDC3AQ59EK9 446 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 OR4C11Q6IEV9 310 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 XKR5Q6UX68 686 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF367Q7RTV3 350 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 GALNT12Q8IXK2 581 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 HUS1BQ8NHY5 278 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 SUN5Q8TC36 379 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 THAP4Q8WY91 577 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 PPP4R1LQ9P1A2 415 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 TRIM64A6NGJ6 449 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 GPR89AB7ZAQ6 455 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 APOL3O95236 402 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 GPR89BP0CG08 455 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 CD70P32970 193 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 VIPR2P41587 438 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 DEFA5Q01523 94 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 RUNX3Q13761 415 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 NPWQ8N729 165 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 PXYLP1Q8TE99 480 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 BORCS8Q96FH0 119 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF778Q96MU6 729 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 MKS1Q9NXB0 559 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 GLS2Q9UI32 602 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 HCN2Q9UL51 889 aa12.27□□□□□ -0.45
SCN8A-209ENST00000627620 IGKV6-21A0A0C4DH24 114 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 H0YJX3 145 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 RTCAO00442 366 aaKnown RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 TGM5O43548 720 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 OR2B3O76000 313 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 RASAL1O95294 804 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SLC10A3P09131 477 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 H2BFMP0C1H6 154 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 BPIP17213 487 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 OR4D2P58180 307 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 E2F1Q01094 437 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 LRIT3Q3SXY7 679 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 RAB6CQ53S08 254 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SEC14L1Q92503 715 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 TUBA1CQ9BQE3 449 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 ARHGAP9Q9BRR9 750 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 RAB6CQ9H0N0 254 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SOX17Q9H6I2 414 aaPredicted RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 BRF2Q9HAW0 419 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SPATA6Q9NWH7 488 aaPredicted RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 LRRN3E7EW58 273 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 CDC40O60508 579 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 HOXD8P13378 290 aaPredicted RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 GTF2IRD2BQ6EKJ0 949 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 RPL13AP3Q6NVV1 102 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 C6orf89Q6UWU4 347 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 GTF2IRD2Q86UP8 949 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 OR52B6Q8NGF0 335 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 DOK4Q8TEW6 326 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SLC45A3Q96JT2 553 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 LRRN3Q9H3W5 708 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 PARPBPQ9NWS1 579 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 STOX2Q9P2F5 926 aaPredicted RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF451Q9Y4E5 1061 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 KLHL33A6NCF5 533 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 DRD2P14416 443 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 NAA10P41227 235 aaPredicted RBP12.26□□□□□ -0.45
SCN8A-209ENST00000627620 MAP2K4P45985 399 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 SPINT3P49223 89 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 LIPKQ5VXJ0 399 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 STEAP4Q687X5 459 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 OR52E8Q6IFG1 317 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 TP53INP2Q8IXH6 220 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 CASTOR1Q8WTX7 329 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 TIGARQ9NQ88 270 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 GSKIPQ9P0R6 139 aa12.26□□□□□ -0.45
SCN8A-209ENST00000627620 PPM1BO75688 479 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms