RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 SKAP2O75563 359 aaPredicted RBP19■□□□□ 0.63
PTCD3-220ENST00000627371 CELA2AP08217 269 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 PRR35P0CG20 571 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 GSTM5P46439 218 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 SLC26A5P58743 744 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 PPP2R2AP63151 447 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 ID2Q02363 134 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 FOLH1Q04609 750 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 KIAA0040Q15053 153 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 NR6A1Q15406 480 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 BTBD16Q32M84 506 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 XKR7Q5GH72 579 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 DNAJB14Q8TBM8 379 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 THOC3Q96J01 351 aaKnown RBP19■□□□□ 0.63
PTCD3-220ENST00000627371 CCT7Q99832 543 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 FAIM2Q9BWQ8 316 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 MANSC1Q9H8J5 431 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 PNO1Q9NRX1 252 aaKnown RBP19■□□□□ 0.63
PTCD3-220ENST00000627371 THAP1Q9NVV9 213 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 VTI1BQ9UEU0 232 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 PCDHA9Q9Y5H5 950 aa19■□□□□ 0.63
PTCD3-220ENST00000627371 C1orf226A1L170 272 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 LSM1O15116 133 aaKnown RBP18.99■□□□□ 0.63
PTCD3-220ENST00000627371 SEC22BO75396 215 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 MYO1DO94832 1006 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 ANXA4P09525 319 aaPredicted RBP18.99■□□□□ 0.63
PTCD3-220ENST00000627371 RPL14P50914 215 aaKnown RBP18.99■□□□□ 0.63
PTCD3-220ENST00000627371 ZNF763Q0D2J5 394 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 BIKQ13323 160 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 RAPSNQ13702 412 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 ELAVL1Q15717 326 aaKnown RBP18.99■□□□□ 0.63
PTCD3-220ENST00000627371 IRAK1BP1Q5VVH5 260 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 TCTN3Q6NUS6 607 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 OR4N5Q8IXE1 308 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 M1APQ8TC57 530 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 UCN3Q969E3 161 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 FCRL1Q96LA6 429 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 SMAD5Q99717 465 aaKnown RBP18.99■□□□□ 0.63
PTCD3-220ENST00000627371 ZNF552Q9H707 407 aaPredicted RBP18.99■□□□□ 0.63
PTCD3-220ENST00000627371 TP53TG5Q9Y2B4 290 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 POLR3HQ9Y535 204 aaPredicted RBP18.99■□□□□ 0.63
PTCD3-220ENST00000627371 PCDHGB7Q9Y5F8 929 aa18.99■□□□□ 0.63
PTCD3-220ENST00000627371 COL6A6A6NMZ7 2263 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 A8MUA0 341 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 KLF11O14901 512 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 PGRMC2O15173 223 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 GPR75O95800 540 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 IFNA16P05015 189 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 PGDP52209 483 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 TAS2R50P59544 299 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 LACTB2Q53H82 288 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-220ENST00000627371 VWA5B1Q5TIE3 1220 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 NOXRED1Q6NXP6 359 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 JMJD6Q6NYC1 403 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-220ENST00000627371 AMER2Q8N7J2 671 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 NFAM1Q8NET5 270 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-220ENST00000627371 C16orf78Q8WTQ4 265 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 SLC39A7Q92504 469 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 C19orf60Q96EN9 201 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 SEMA4CQ9C0C4 833 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 SLC25A18Q9H1K4 315 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 MMP25Q9NPA2 562 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 PFDN4Q9NQP4 134 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 DLGAP4Q9Y2H0 992 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 TMED5Q9Y3A6 229 aa18.98■□□□□ 0.63
PTCD3-220ENST00000627371 MYOCOSA0A1B0GUC4 107 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 WASHC1A8K0Z3 465 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 PDGFAP04085 211 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 ALPPP05187 535 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 IL3P08700 152 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 ITGAMP11215 1152 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 STT3AP46977 705 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 RPL38P63173 70 aaKnown RBP18.97■□□□□ 0.63
PTCD3-220ENST00000627371 PLIN5Q00G26 463 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 OCRLQ01968 901 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 PDCD2Q16342 344 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-220ENST00000627371 SOWAHCQ53LP3 525 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-220ENST00000627371 SLC48A1Q6P1K1 146 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 MMP21Q8N119 569 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 TMEM132CQ8N3T6 1108 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 B3GNT7Q8NFL0 401 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 BRIX1Q8TDN6 353 aaKnown RBP18.97■□□□□ 0.63
PTCD3-220ENST00000627371 PSMF1Q92530 271 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 PPP3R2Q96LZ3 170 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 C3orf30Q96M34 536 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 DGAT2Q96PD7 388 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 PELOQ9BRX2 385 aaKnown RBP18.97■□□□□ 0.63
PTCD3-220ENST00000627371 HEY2Q9UBP5 337 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 RALYQ9UKM9 306 aaKnown RBP18.97■□□□□ 0.63
PTCD3-220ENST00000627371 CES1P1Q9UKY3 287 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 PPIEQ9UNP9 301 aaKnown RBP18.97■□□□□ 0.63
PTCD3-220ENST00000627371 ZNF451Q9Y4E5 1061 aa18.97■□□□□ 0.63
PTCD3-220ENST00000627371 CNTRLQ7Z7A1 2325 aa18.96■□□□□ 0.63
PTCD3-220ENST00000627371 K7EM74 188 aa18.96■□□□□ 0.63
PTCD3-220ENST00000627371 ATP8B1O43520 1251 aa18.96■□□□□ 0.63
PTCD3-220ENST00000627371 JUNP05412 331 aaKnown RBP18.96■□□□□ 0.63
PTCD3-220ENST00000627371 COX7A2P14406 83 aa18.96■□□□□ 0.63
PTCD3-220ENST00000627371 DRD2P14416 443 aa18.96■□□□□ 0.63
PTCD3-220ENST00000627371 ALOX15P16050 662 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-220ENST00000627371 NR1D1P20393 614 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms